Query= MSMg01no056_e23.b1 MSMg01no056_e23.b1 CHROMAT_FILE:
MSMg01no056_e23.b1 PHD_FILE: MSMg01no056_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:56 2005
(633 letters)
>mm_chr14_113133195_113134226
Length = 1032
Score = 1147 bits (593), Expect = 0.0
Identities = 623/633 (98%), Gaps = 1/633 (0%)
Strand = Plus / Minus
Query: 1 caggccttgaactcagaaatctgcctgcttctgcctcccaagtgctgggactaaaggcat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 956 caggccttgaactcagaaatctgcctgcttctgcctcccaagtgctgggattaaatgcat 897
Query: 61 gtgccaccatgcctgacaaaattgtcatttttaattttaaaaaattcattaaacttttat 120
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gtgccaccacgcctggcaaaattgtcatttttaattttaaaaaattcattaaacttttat 837
Query: 121 ttatcttgaatttacagatttttgaatgtttgggcatttattcttaatttcaaaaatgtg 180
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 836 ttatcttgaatttacagatttttgaatgtttaggcatttattcttaatttcaaatatgtg 777
Query: 181 ttccttaattttgaaaaactttttttttaactccatctacaacagaggcattatctgacc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ttccttaattttgaaaaac-ttttttttaactccatctacaacagaggcattatctgacc 718
Query: 241 tgataataaagtgattattctaactcaaaattccttttactgttcaccgtatcaaataga 300
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 717 tgataataaagtgattattctaactcaaaattccttttactattcaccatatcaaataga 658
Query: 301 aatcactgtgggttattaactgcttatttataaaaaacaacagagaagaaattacaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aatcactgtgggttattaactgcttatttataaaaaacaacagagaagaaattacaattt 598
Query: 361 gctaccttgttttatcactagtttagtaaattatcaaaataatgaataataatgtatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gctaccttgttttatcactagtttagtaaattatcaaaataatgaataataatgtatggt 538
Query: 421 tgtcatgaacttgcattatccagagcaccattttcaaaactcataacatgtagcaagggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgtcatgaacttgcattatccagagcaccattttcaaaactcataacatgtagcaagggt 478
Query: 481 tatttacaatggcctgagggcaatgtagtgaagctctatcagtgagaaatgatttgctgt 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 477 tatttacaatggcctgagggcaatgtattgaagctctatcagtgagaaatgatttgctgt 418
Query: 541 gggttgttatgctatttgaaagtgttcttagaagaggtaggaacacattctaaaacataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gggttgttatgctatttgaaagtgttcttagaagaggtaggaacacattctaaaacataa 358
Query: 601 tgtcatctacaagaaatggctttttctgacaat 633
|||||||||||||||||||||||||||||||||
Sbjct: 357 tgtcatctacaagaaatggctttttctgacaat 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_e23.g1 MSMg01no056_e23.g1 CHROMAT_FILE:
MSMg01no056_e23.g1 PHD_FILE: MSMg01no056_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:56 2005
(628 letters)
>mm_chr14_113080090_113081117
Length = 1028
Score = 1149 bits (594), Expect = 0.0
Identities = 621/632 (98%), Gaps = 4/632 (0%)
Strand = Plus / Plus
Query: 1 agctgcaaagcaagctggggttgaagaatgaacaagaaaaggaggaagctggtcatcggg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctgcaaagcaagctgggtttgaagaatgaacaagaaaaggaggaagctggtcatcggg 260
Query: 61 taaaaaagttacagaaaattggtaaaagggttttgtttaacattatcatattctgtcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaaaagttacagaaaattggtaaaagggttttgtttaacattatcatattctgtcctt 320
Query: 121 caacatacacaggagatgaaattgaaaatattgctcactagacagtattatctttttatt 180
||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 caacacacacaggagatgacattgaaaatattgctcactagacaatattatctttttatt 380
Query: 181 aattttaattttctagataagaatataattataattttccatccttgcctttcctcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattttaattttctagataagaatataattataattttccatccttgcctttcctcctgc 440
Query: 241 caatttttcttctgtaccctctggctctatttaaagttcattgattagtttttcattaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatttttcttctgtaccctctggctctatttaaagttcattgattagtttttcattaat 500
Query: 301 tgttaaaaccaacaaacacacatacacacacaaacacacacacacacacacacacacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttaaaaccaacaaacacacatacacacacaaacacacacacacacacacacacacaca 560
Query: 361 cacacaca----tatacacacacacacttccaaatatgtgtctaatggtattgttctttt 416
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacacacacacatatacacacacacacttccaaatatgtgtctaatggtattgttctttt 620
Query: 417 taaggtcctccttaagagttgatattgtcaagagtttatggagatatcttccctatacat 476
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 621 taaggtcctccttaagagttgatattgtcaagagtttatgaagatattttccctatacat 680
Query: 477 cctcaagacacaattttacaggaagctcctgttttctggctcttgctttcttcctgcccc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctcaagacacaattttacaggaagctcctgttttctggctcttgctttcttcctgcccc 740
Query: 537 tgctttcacatcttaattaatcattttggtgcagatgtactactgttgattcatctgtct 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgctttcacatcttaattaatcattttggtgcagatgtactactgttgattcatctgtct 800
Query: 597 agatgggacaccacacaatctcctattctcta 628
||||||||||||||||| ||||||||||||||
Sbjct: 801 agatgggacaccacacagtctcctattctcta 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
