Query= MSMg01no061_p18.b1 MSMg01no061_p18.b1 CHROMAT_FILE:
MSMg01no061_p18.b1 PHD_FILE: MSMg01no061_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:06 2005
(586 letters)
>mm_chr14_112929986_112930971
Length = 986
Score = 605 bits (313), Expect = e-177
Identities = 355/371 (95%), Gaps = 4/371 (1%)
Strand = Plus / Minus
Query: 5 ggaattcagggcacttgcaaacacatatcagcagcaaaatgagtgtagagaaaggtaatc 64
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ggaattcagggcacagggaaacacatatcagcagcaaaatgagtgtagagaaaggtaatc 312
Query: 65 aattttaatgcaaaatatatgttgaggctgagatctcagtgagttgattgctatttcgtg 124
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 311 aattttaatgcaaaatatatgttgaggctgagagctcagtgagttgattgctatttcgtt 252
Query: 125 tgaatttgactcaagttaaaatttgggttttttttgcagtttttattgactcatttattc 184
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 251 tgaatttaactcaagttaaaatttgggttttttttgcagtttttattaactcatttattc 192
Query: 185 actttacatcccagtatcagccc----ccccccggcctatatttcctttcccctcacagc 240
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 191 actttacatcccagtatcagccccccaccccccggcctatatttcctttcccctcacagc 132
Query: 241 ttctccctcattccccctccccttctcctttgagaagggggacgtccccactggtttcac 300
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 131 ttctccctcattcaccctccccttctcctttgagaagggggaggtccccactggtttcac 72
Query: 301 caccaccctagcacatctactcattccagaactagctgcatcctctctctttgaggcaag 360
||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 71 caccaccctggcacatcaactcattccagaactagctgcaacctctctctttgaggcaag 12
Query: 361 agaagacagtc 371
|||||||||||
Sbjct: 11 agaagacagtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_p18.g1 MSMg01no061_p18.g1 CHROMAT_FILE:
MSMg01no061_p18.g1 PHD_FILE: MSMg01no061_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:06 2005
(620 letters)
>mm_chr14_112886815_112887834
Length = 1020
Score = 948 bits (490), Expect = 0.0
Identities = 589/622 (94%), Gaps = 4/622 (0%)
Strand = Plus / Plus
Query: 1 tgtgatgaatatcaacttaaggtagacaggaacttcttttggctgagagtcacacaaaat 60
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tgtgctgaatatcaacttaaggtagacaggaacttattttggctgagagtcacacaaaat 260
Query: 61 atacagtccattattataatgaaggcatggctagcacagtatgagttttctctgtgtaga 120
||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 261 atatagtccattattataatgaaggcatggctaccacagtatgagttttttctgtgtagt 320
Query: 121 cagaaatcaggaaatgaacaaatatgtaaggtgagtttgttgtaaaaaactcaaatacta 180
|||||| ||||||| |||||||||||| ||| |||||||||||||||| |||||||||||
Sbjct: 321 cagaaagcaggaaaagaacaaatatgtgaggcgagtttgttgtaaaaa-ctcaaatacta 379
Query: 181 cctcca-gtgtcatacttcctttagaaatattccccctctaaaagttcagaactttccaa 239
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 380 cctccaagtgtcatacttcctttagaaatattccccgtctaaaagttcagaactttccaa 439
Query: 240 atggcatccccagatggaaaacatctgttcaactatttgaagtcatggagagcattgcaa 299
|||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct: 440 atggcatccccagacggaaaacatctgttcaactatttgaggtcatagagatcattgcaa 499
Query: 300 attcatatttcaacaaatgatcatgttattctcacggggaaatatattcaataactgcat 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 attcatatttcaacaaatgatcatgttattctcagggggaaatatattcaataactgcat 559
Query: 360 attgattcagagacaaggaactaatggggcctaggttcacaaaacagtgaccattctttg 419
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 attgattcagaaacaaggaactaatggggcctaggttcataaaacagtgaccattctttg 619
Query: 420 agattgtcaagaggcatagctttatgcaatat-agtgagctagtccctattgctttgtta 478
||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 620 agattgtcatgaggcatagctttatgcaat-tcagtgagctagtccctattgctttgtta 678
Query: 479 ttggactcatggaaataaactaaaaaataacaaattttagccagaggagatctgttgcca 538
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 679 ttggactcctggaaataaactaaaaaataacaaattttagtaagaggagatctgttgcca 738
Query: 539 gatcttcactcagagctaatctacataacaccagtcttcagttacactctgaaattactg 598
|||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||
Sbjct: 739 gatcttcactcagagctaatctacataatgccaatcttcagttacaaactgaaattattg 798
Query: 599 aagcctgcccgttatggcagtt 620
|||||||||| |||||||||||
Sbjct: 799 aagcctgcccattatggcagtt 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
