Query= MSMg01no063_n07.b1 MSMg01no063_n07.b1 CHROMAT_FILE:
MSMg01no063_n07.b1 PHD_FILE: MSMg01no063_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:21 2005
(326 letters)
>mm_chr14_10636882_10637608
Length = 727
Score = 601 bits (311), Expect = e-176
Identities = 323/327 (98%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 1 cagatctgtttgactctaacaattttttt-cttaattatgaattataaattggcagagtt 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 201 cagatctgtttgactctaacaattttttttcttaattatgaattataaattggtagagtt 260
Query: 60 gtttaactttaaaggattttgtgactaaataaatgaataaagttaccatggggacaaaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttaactttaaaggattttgtgactaaataaatgaataaagttaccatggggacaaaga 320
Query: 120 gagaacacaatttagatattggatatgaattggtaaacagatgtatgtcactaaaaagcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaacacaatttagatattggatatgaattggtaaacagatgtatgtcactaaaaagcc 380
Query: 180 atagttttcattgtaatagtttactgtctcttgccaaaaaccccaggaaagctgttttca 239
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagttttcattgtaatagtgtactgtctcttgccaaaaaccccaggaaagctgttttca 440
Query: 240 tactgcagaaatgcatctggttaaaaggggaataaatgtggtcaagtacctaagacagtt 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tactgcagaaatgcagctggttaaaaggggaataaatgtggtcaagtacctaagacagtt 500
Query: 300 aattcattcattgccaagaacctgcat 326
|||||||||||||||||||||||||||
Sbjct: 501 aattcattcattgccaagaacctgcat 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 727
Length adjustment: 9
Effective length of query: 317
Effective length of database: 718
Effective search space: 227606
Effective search space used: 227606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_n07.g1 MSMg01no063_n07.g1 CHROMAT_FILE:
MSMg01no063_n07.g1 PHD_FILE: MSMg01no063_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:21 2005
(279 letters)
>mm_chr14_10801811_10802490
Length = 680
Score = 534 bits (276), Expect = e-156
Identities = 279/280 (99%), Gaps = 1/280 (0%)
Strand = Plus / Minus
Query: 1 cattttcacctttccttc-cactaagcctcagtagcgcaggacacttagggacagagaag 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cattttcacctttccttcacactaagcctcagtagcgcaggacacttagggacagagaag 421
Query: 60 ccactttctgcagcatttaagaaaaccattaaccacttttactgcaaatctctgagcatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ccactttctgcagcatttaagaaaaccattaaccacttttactgcaaatctctgagcatg 361
Query: 120 tgttcaggtgctttctcacttgtgttttgctaggcctgctgggatatgaagcctttggag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgttcaggtgctttctcacttgtgttttgctaggcctgctgggatatgaagcctttggag 301
Query: 180 tagcatttttaattctcccttttattttctacccctccaattatctctatttattccctc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tagcatttttaattctcccttttattttctacccctccaattatctctatttattccctc 241
Query: 240 tttaagaataagcaggaggtgggttatttttttgattgtt 279
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tttaagaataagcaggaggtgggttatttttttgattgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 680
Length adjustment: 9
Effective length of query: 270
Effective length of database: 671
Effective search space: 181170
Effective search space used: 181170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
