Query= MSMg01no063_n16.b1 MSMg01no063_n16.b1 CHROMAT_FILE:
MSMg01no063_n16.b1 PHD_FILE: MSMg01no063_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:23 2005
(312 letters)
>mm_chr14_90780157_90780869
Length = 713
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctcatttacaa-tatattggctaaagtaacaacaattatatctgatcaaagag 62
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggaattcctcatttagaattatattggctaaagtaacaacaattatatctgatcaaagag 338
Query: 63 agtaaatatgttccttccaactactgacctgaagactagaagttaatttatgaataacac 122
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agtaaatatgttaattccaactactgacctgaagactagaagttaatttatgaataacac 278
Query: 123 atataaagctcagaaaacatgctagcttgttgttaaattttgatttaagaaagtttaaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atataaagctcagaaaacatgctagcttgttgttaaattttgatttaagaaagtttaaaa 218
Query: 183 gctgagtgtgatatgcacttgggagacagagcaaggcggatctctgtgacattgaggcta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gctgagtgtgatatgcacttgggagacagagcaaggcggatctctgtgacattgaggcta 158
Query: 243 acctgcaaacagagcaagttcaggtcagccatggctatttcacagaaaaaccctgtaaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 acctgcaaacagagcaagttcaggtcagccatggctatttcacagaaaaaccctgtaaac 98
Query: 303 ccaaaaatga 312
||||||||||
Sbjct: 97 ccaaaaatga 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_n16.g1 MSMg01no063_n16.g1 CHROMAT_FILE:
MSMg01no063_n16.g1 PHD_FILE: MSMg01no063_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:23 2005
(600 letters)
>mm_chr14_90710394_90711393
Length = 1000
Score = 1160 bits (600), Expect = 0.0
Identities = 600/600 (100%)
Strand = Plus / Plus
Query: 1 acttggcttctaaatgaggcaatcctctccctgaatgtatttattaccaatgtatttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttggcttctaaatgaggcaatcctctccctgaatgtatttattaccaatgtatttcaa 260
Query: 61 ttgtgagagatggtgtaaaaagttggaactcacagcatctggacagaaatatgaagacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgagagatggtgtaaaaagttggaactcacagcatctggacagaaatatgaagacgg 320
Query: 121 gttgaccttgcaggtgatgagttatttgcaatgcttcagtagtattccatatgcagtagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgaccttgcaggtgatgagttatttgcaatgcttcagtagtattccatatgcagtagg 380
Query: 181 taaacagcgtgatattgccaacagggggagctaaagacagaagacaaatgaagcctttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaacagcgtgatattgccaacagggggagctaaagacagaagacaaatgaagcctttgt 440
Query: 241 gcataggaatgtaatttagctgaactgacaatatattataccttaatagcacctcagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcataggaatgtaatttagctgaactgacaatatattataccttaatagcacctcagagt 500
Query: 301 gagtttaattgatgacctaacttagatattctcttagagtatctttgcactggattggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtttaattgatgacctaacttagatattctcttagagtatctttgcactggattggat 560
Query: 361 gcaagctgggtgcttaagtgtgcttccctgctgctaatagtgtgactgccatctggagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaagctgggtgcttaagtgtgcttccctgctgctaatagtgtgactgccatctggagaa 620
Query: 421 gataccagctaatatgttcccggaatgtgtttctccattgttactgcttaaacaaacaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gataccagctaatatgttcccggaatgtgtttctccattgttactgcttaaacaaacaat 680
Query: 481 tcagagagcttcggataagctctgagaatagacaacacaagtgcttccctgactgggact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcagagagcttcggataagctctgagaatagacaacacaagtgcttccctgactgggact 740
Query: 541 ggagaaagtttaagcagacaaacatcactaagactgtacattgtactctcctttgcagtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggagaaagtttaagcagacaaacatcactaagactgtacattgtactctcctttgcagtc 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
