Query= MSMg01no064_a14.b1 MSMg01no064_a14.b1 CHROMAT_FILE:
MSMg01no064_a14.b1 PHD_FILE: MSMg01no064_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:39 2005
(423 letters)
>mm_chr14_50772253_50773075
Length = 823
Score = 764 bits (395), Expect = 0.0
Identities = 404/407 (99%)
Strand = Plus / Minus
Query: 15 gaattcataaaagtcacttcactccacaaatttgtccttgcagctaaaagaacatccatt 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattcataaaagtcacttcactccacaaatttgtccttgcagctaaaagaacatccatt 562
Query: 75 ttgtctaatgctcatgtaattgcccaccgcgaaggatgccattaattttgttgcagtgag 134
|||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 561 ttgtctaatgctcatgtaattgcctacagtgaaggatgccattaattttgttgcagtgag 502
Query: 135 aaagtgtgttgtgaaaaatagtggtaatccccactggaagataacccttggattcttttc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagtgtgttgtgaaaaatagtggtaatccccactggaagataacccttggattcttttc 442
Query: 195 tccaaagcctcaagtggtcacttaactaaatgtatgggcttttccactttgacaaaacaa 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccaaagcctcaagtggtcacttaactaaatgtatgggcttttccactttgacaaaacaa 382
Query: 255 aaaggtacctataaataccattaattgaaagaaattaaacccacatttaaaaaatgaaga 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggtacctataaataccattaattgaaagaaattaaacccacatttaaaaaatgaaga 322
Query: 315 attcactttgcctctctgatatgtgttataacaggtgagatattcttgacaaaatatgct 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcactttgcctctctgatatgtgttataacaggtgagatattcttgacaaaatatgct 262
Query: 375 ttcagtgtgtccagttgcatagtgtatttaactattacattgcacct 421
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagtgtgtccagttgcatagtgtatttaactattacattgcacct 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_a14.g1 MSMg01no064_a14.g1 CHROMAT_FILE:
MSMg01no064_a14.g1 PHD_FILE: MSMg01no064_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:39 2005
(390 letters)
>mm_chr14_50555976_50556765
Length = 790
Score = 625 bits (323), Expect = 0.0
Identities = 374/391 (95%), Gaps = 2/391 (0%)
Strand = Plus / Plus
Query: 1 caaatagaacacgcaacctaatcatgttaattgataaagcagaaactggcccctaatacc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 caaatagaacacgcaacctaatcatgttaattgataaagcagaaactggcccctaataac 260
Query: 61 ccctcggggtctcctgtaagactgatttcttcccttgtcagtggcttctgggacttttga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctcggggtctcctgtaagactgatttcttcccttgtcagtggcttctgggacttttga 320
Query: 121 aaagagtgaaaaactttgggaaaatctagaaccacatttcttagtgtctgaaataaaaac 180
||||||||||||||||| |||||| ||| |||||||||||||| |||||||||| ||| |
Sbjct: 321 aaagagtgaaaaactttcggaaaacctacaaccacatttcttattgtctgaaattaaagc 380
Query: 181 cgtaggaatatgaattctaactatatttaccatataagcctgttctaatttccctactct 240
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaggaatatgaattctaactatatttaccatataagcctgttctaatttccctactct 440
Query: 241 aaatacacaaagcactaactctttcaaggaccagttcttgtcactgttatacagcactta 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatacacaaagcactaactctttcaaggaccagttcttgtcactgttatacagcacttt 500
Query: 301 gattaatatatgcttccaaaaagattatagacctgtattgcttatgttttgatcattcag 360
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 501 gattaatatatgcttccaaaaagattatagacctgtattgcttatcttttgatcatgcag 560
Query: 361 aggcattggtata-tcaattattttttttgt 390
||||||||||| | |||||||| || |||||
Sbjct: 561 aggcattggta-agtcaattatcttctttgt 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
