Query= MSMg01no065_e05.b1 MSMg01no065_e05.b1 CHROMAT_FILE:
MSMg01no065_e05.b1 PHD_FILE: MSMg01no065_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:43 2005
(503 letters)
>mm_chr14_10902193_10903091
Length = 899
Score = 876 bits (453), Expect = 0.0
Identities = 477/487 (97%), Gaps = 4/487 (0%)
Strand = Plus / Plus
Query: 17 gaattctggatagtcttgaactctgaataattctaaaaccaccagctacatcaaatggag 76
|||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 217 gaattctggagagtcttgagctctgaataattctaaaatcaccagctacatcaaatggag 276
Query: 77 acaaaagacaagtctatgtctgtatatgctgagctaccagtaaacctgctggtaagtgct 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 acaaaagacaagtctatgtctgtatatgctgagctaccagtaaacctgctggtaagtgct 336
Query: 137 tgcaggaggttacttagtcaacataatagctaaaattgtggttcacagtgtatggctcag 196
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgcaggaggtta----gtcaacataatagctaaaattgtggttcacagtgtatggctcag 392
Query: 197 aaataaacaatatacaaagcctatccttcatagctattttgaattttatatataatgcat 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aaataaacaatatacaaagcctatccttcatagctattttgaattttatatataatgcat 452
Query: 257 gtacaatgtctgatttggtcatatataatttccaagaacctttgcttatggttttttaaa 316
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 453 gtacaatgtctgatttggtcatatataatttccaagaacctttccttatggttttttaaa 512
Query: 317 atattgtttcataggtcagcataaactggtcaagaacttcctatacaatacacctgactc 376
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 513 atattgtttcataggtcagcataaactggtcaagaacttcctatacaacacacctgactc 572
Query: 377 tgaattttcagtcatctttaagagatcattgaaagcctttacaatgacaaaagataattc 436
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 573 tgaattttcagtcatctttaagagatcattgaaagcctttacaatgataaaagataattc 632
Query: 437 ttagactaagaatacatttattttctaatggtaaatgacattttccaagacctaattcct 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ttagactaagaatacatttattttctaatggtaaatgacattttccaagacctaattcct 692
Query: 497 tgatgtg 503
|||||||
Sbjct: 693 tgatgtg 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 899
Length adjustment: 10
Effective length of query: 493
Effective length of database: 889
Effective search space: 438277
Effective search space used: 438277
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_e05.g1 MSMg01no065_e05.g1 CHROMAT_FILE:
MSMg01no065_e05.g1 PHD_FILE: MSMg01no065_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:43 2005
(502 letters)
>mm_chr14_11003347_11004248
Length = 902
Score = 905 bits (468), Expect = 0.0
Identities = 495/506 (97%), Gaps = 4/506 (0%)
Strand = Plus / Minus
Query: 1 tgtggtgccacatgaggtagaattcaccttctcaactaatg----tgtttgtttgattgt 56
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 772 tgtggtgccacatgaggtagaattcaccttctcaactaatgtgtttgtttgtttgtttgt 713
Query: 57 ttgtttgttttttaaacttaggtttgctgtccatgatgatagatcccatccacagtggga 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ttgtttgttttttaaacttaggtttgctgtccatgatgatagatcccatccacagtggga 653
Query: 117 tttaattcatgcaaaacatggccagcgtgaccagaaagctcaggatctgaacttgtaagc 176
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 652 tttaattcatgcaaaacatggccagcatgaccagaaagctcaggatctgaacttgtaagc 593
Query: 177 acacttgagacccttctcttaaacgttcctgattctttcatctcagttagttctttcctg 236
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 592 acacttgagacccttctcttaaacgctcctgattctttcatctcagttagttctttcctg 533
Query: 237 tgagcacagtctatttcccctaaattctggaagggcaacagaatgggaattacactttct 296
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgagcacagtcaatttcccctaaattctggaagggcaacagaatgggaattacactttct 473
Query: 297 cagattgaattttatggctttaaacaagggactacttcttttccaactgtagctttcagg 356
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 472 cggattgaattttatggctttaaacaagggactacttcttttccaactgtatctttcagg 413
Query: 357 tatgtttcagactcttcagctctgccttgttgtgaagaaagcatacagttaggtgacctt 416
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 412 tatgtttcagactcttcagctctgccttgttgtgaagaaagcatacagttaagtgacctt 353
Query: 417 cagtctacccctgacctctcttccattaatgcttattatgcagtgtctggtcagaagagg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cagtctacccctgacctctcttccattaatgcttattatgcagtgtctggtcagaagagg 293
Query: 477 tccctgaaatagatgttttcctccca 502
||||||||||||||||||||||||||
Sbjct: 292 tccctgaaatagatgttttcctccca 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
