Query= MSMg01no065_h20.b1 MSMg01no065_h20.b1 CHROMAT_FILE:
MSMg01no065_h20.b1 PHD_FILE: MSMg01no065_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:00 2005
(543 letters)
>mm_chr14_86201015_86201957
Length = 943
Score = 1007 bits (521), Expect = 0.0
Identities = 533/537 (99%), Gaps = 2/537 (0%)
Strand = Plus / Minus
Query: 4 gaattcctgaa-tttacctctaagaccctcaagtgttcagtgattcctataggttatcct 62
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaattcctgaattttaactctaagaccctcaagtgttcagtgattcctataggttatcct 605
Query: 63 ctgagctctgcatctacaatgtagcatgttcccaacaacaactcctcagtatcagtcact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctgagctctgcatctacaatgtagcatgttcccaacaacaactcctcagtatcagtcact 545
Query: 123 tccaatatcattcgttttccacaccagcaaaggtatttttagcatattatgatttcattt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tccaatatcattcgttttccacaccagcaaaggtatttttagcatattatgatttcattt 485
Query: 183 cgtaggatttgcataacattctaaaataaaataatattgacaagtgtagaattaaataga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cgtaggatttgcataacattctaaaataaaataatattgacaagtgtagaattaaataga 425
Query: 243 agacaaagaatatgtcaggattcattacatatagtgatatatagttttaaaaaattattt 302
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 424 agacaaagaatatgtcaggattcattacatatagtgatatatagtttt-aaaaattattt 366
Query: 303 agttcataaagataacaagttgtgatttaactatacaaattagtatttttaaaagttctc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agttcataaagataacaagttgtgatttaactatacaaattagtatttttaaaagttctc 306
Query: 363 ttttctgacatgtataaggtacagtcatctctttctactcaagtgtttaacacatactat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 305 ttttctgacatgtataaggtacagtcatctctttctactcaagtgtttaacacgtactat 246
Query: 423 acattacacttttcattacttctaagaactctctggattgggtatttatatttttattat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acattacacttttcattacttctaagaactctctggattgggtatttatatttttattat 186
Query: 483 tatattccattatacagcctgaagattagtaaagtttggatgatcaatgttacaatg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tatattccattatacagcctgaagattagtaaagtttggatgatcaatgttacaatg 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_h20.g1 MSMg01no065_h20.g1 CHROMAT_FILE:
MSMg01no065_h20.g1 PHD_FILE: MSMg01no065_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:01 2005
(491 letters)
>mm_chr14_86078921_86079812
Length = 892
Score = 897 bits (464), Expect = 0.0
Identities = 485/492 (98%), Gaps = 1/492 (0%)
Strand = Plus / Plus
Query: 1 caggtagattgtagaagagaactgagtctattttatatttagggcaaagttgaacagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtagattgtagaagagaactgagtctattttatatttagggcaaagttgaacagatt 260
Query: 61 aagataatctgtccatgtgactccatctgcaaacctatttaagcagacaacaagagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagataatctgtccatgtgactccatctgcaaacctatttaagcagacaacaagagcttg 320
Query: 121 gttttataatggccaagtctattttatttttcttttttcagtcccatattttaaagttaa 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttttctaatggccaagtctattttatttttcttttttcagtcccatattttaaagttaa 380
Query: 181 ctgttatattttcaatgtttcataaaggtggctgaaaggcaagaaaagacagttcttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ctgttatattttcaatgtttcataaaggtggctgaaaggcaagaaaagatagttcttgtt 440
Query: 241 ttctttctttcttttcttaataggcagtagtatgaacagacataatacctaggtaattac 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctttctttcttttcttaataggcagtagtatgaacagacataatacctaggtaattac 500
Query: 301 ccatgtgctttaattttatctttataagatcaaaattcatccctaatcactctttttctg 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ccatgtgctttaattttatctttataagatcaaaattcaaccctaatcactctttttctg 560
Query: 361 gcttaagtctgtctttccaagaacagtattttgactgtctgatgagttagaaaacaaaat 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttaagtccgtctttccaagaacagtattttgactgtctgatgagttagaaaacaaaat 620
Query: 421 gacatgaccattaatttttctattttttt-cagccaaagtacagagaagaaagacataaa 479
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 621 gacatgaccattaatttttctattttttttcagccaaagtacagagaagaaaggcataaa 680
Query: 480 atgaaggcaaag 491
||||||||||||
Sbjct: 681 atgaaggcaaag 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 892
Length adjustment: 10
Effective length of query: 481
Effective length of database: 882
Effective search space: 424242
Effective search space used: 424242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
