Query= MSMg01no066_n11.b1 MSMg01no066_n11.b1 CHROMAT_FILE:
MSMg01no066_n11.b1 PHD_FILE: MSMg01no066_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:46 2005
(460 letters)
>mm_chr14_90205736_90206596
Length = 861
Score = 868 bits (449), Expect = 0.0
Identities = 455/457 (99%), Gaps = 1/457 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatatggatatcctgatgcacatac-ttgtttggatttattgcaagttatttgg 63
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 472 gaattcaatatggatattctgatgcacatacattgtttggatttattgcaagttatttgg 413
Query: 64 tgaaactcatgatgtacatttttgttttttttctcctgagatttggcattatgtatgaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgaaactcatgatgtacatttttgttttttttctcctgagatttggcattatgtatgaca 353
Query: 124 acccaatatataattatgccactaccaaacatgtatttataatatgaatattatcctgag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 acccaatatataattatgccactaccaaacatgtatttataatatgaatattatcctgag 293
Query: 184 tatattttgtcctaaaagatggctggaaaatttcaagcctaattcgtgcctcaacattta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tatattttgtcctaaaagatggctggaaaatttcaagcctaattcgtgcctcaacattta 233
Query: 244 cttttattttccttttcttaatttaaaattttgtatttatgtatattattttccataaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cttttattttccttttcttaatttaaaattttgtatttatgtatattattttccataaat 173
Query: 304 gtaaatgatccagctgtatgccattcctgtggatgccagaagagagtgttgtgtcctctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gtaaatgatccagctgtatgccattcctgtggatgccagaagagagtgttgtgtcctctg 113
Query: 364 gaactgggctatatgaatgctagaaactaaactctgcttcactggaaacacattactcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gaactgggctatatgaatgctagaaactaaactctgcttcactggaaacacattactcat 53
Query: 424 tcttacctaccctctcatctcgctaaaccccatactt 460
|||||||||||||||||||||||||||||||||||||
Sbjct: 52 tcttacctaccctctcatctcgctaaaccccatactt 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 861
Length adjustment: 10
Effective length of query: 450
Effective length of database: 851
Effective search space: 382950
Effective search space used: 382950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_n11.g1 MSMg01no066_n11.g1 CHROMAT_FILE:
MSMg01no066_n11.g1 PHD_FILE: MSMg01no066_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:46 2005
(500 letters)
>mm_chr14_90075396_90076295
Length = 900
Score = 959 bits (496), Expect = 0.0
Identities = 499/500 (99%)
Strand = Plus / Plus
Query: 1 attacaagtaggaataatcagttaacccttgctctagagtggaggaatgacttagtagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attacaagtaggaataatcagttaacccttgctctagagtggaggaatgacttagtagga 260
Query: 61 ttctggtaaattcctgatacaaattgtgaaaaaaaatgcatgttgctctttaagtttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctggtaaattcctgatacaaattgtgaaaaaaaatgcatgttgctctttaagtttctt 320
Query: 121 gttaagttataatcaatatagaatggccataagcaattaaaggttgaacaataggttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaagttataatcaatatagaatggccataagcaattaaaggttgaacaataggttaaa 380
Query: 181 gattgaaaagaaaagttcgtgtaatccttacaaatgtaaaattgtaaagatggcgctaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattgaaaagaaaagttcgtgtaatccttacaaatgtaaaattgtaaagatggcgctaag 440
Query: 241 agatccacaatcaggagaactcatctacaattattagacctttctcagccaccaaatagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatccacaatcaggagaactcatctacaattattagacctttctcagccaccaaatagg 500
Query: 301 gatggagaggaaaaatgggaaaaaacactcaacttttccaggacattcttgttggtggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatggagaggaaaaatgggaaaaaacactcaacttttccaggacattcttgttggtggta 560
Query: 361 gaaatttttgtagactatatatcaaaatgacagaaaggaagagaacttctatccccagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaatttttgtagactatatatcaaaatgacagaaaggaagagaacttctatccccagag 620
Query: 421 ggatccttccccttcaccttaaacatctctgaaatggctttattgatcagtctagacttt 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 ggatccttccccttcaccttaaacatctctgaaatggttttattgatcagtctagacttt 680
Query: 481 gggcactatatcatgcaagg 500
||||||||||||||||||||
Sbjct: 681 gggcactatatcatgcaagg 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
