Query= MSMg01no066_p21.b1 MSMg01no066_p21.b1 CHROMAT_FILE:
MSMg01no066_p21.b1 PHD_FILE: MSMg01no066_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:58 2005
(332 letters)
>mm_chr14_76354537_76355268
Length = 732
Score = 627 bits (324), Expect = 0.0
Identities = 330/332 (99%)
Strand = Plus / Minus
Query: 1 aacttctaggaaaatatacaaaatgaggggaaaggagcctcctgggaatgttagaatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aacttctaggaaaatatacaaaatgaggggaaaggagcctcctgggaatgttagaatcat 473
Query: 61 ttaccttttagacagacgcatacgattagtagaagtacttctcttctttttcaaagatgg 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttaccttttagacagacgcatgcgattagtagaagtacttctcttctttttcaaagatgg 413
Query: 121 tagatggaggagtgatttgtgaataagagggttacttcaaaagtctagatcgggtcagaa 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 412 tagatggaggagtgatttgtgaataagagggttatttcaaaagtctagatcgggtcagaa 353
Query: 181 tcctcggaactagccgcctggttgtgatgtagctagagttggaatcatccttaaaggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tcctcggaactagccgcctggttgtgatgtagctagagttggaatcatccttaaaggtgt 293
Query: 241 ccacatgcaaatggatctcccgaagtcttgtggaaatgaacttctggatgcctgaggact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ccacatgcaaatggatctcccgaagtcttgtggaaatgaacttctggatgcctgaggact 233
Query: 301 tcctaaccctgctgagctcactgctcacgtgc 332
||||||||||||||||||||||||||||||||
Sbjct: 232 tcctaaccctgctgagctcactgctcacgtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_p21.g1 MSMg01no066_p21.g1 CHROMAT_FILE:
MSMg01no066_p21.g1 PHD_FILE: MSMg01no066_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:58 2005
(356 letters)
>mm_chr14_76187242_76187992
Length = 751
Score = 603 bits (312), Expect = e-177
Identities = 343/356 (96%), Gaps = 5/356 (1%)
Strand = Plus / Plus
Query: 1 acctctcgtaaacttcttaaaccagagctctcgttttctttttctttttttcattagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctctcgtaaacttcttaaaccagagctctcgttttctttttctttttttcattagcta 260
Query: 61 tttatttactttacaatctgaccggagcctctcgtttcctaaactcttcttaactttggc 120
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ttta-----tttacaatctgaccggagcctctagtttcctaaactcttcttaactttggc 315
Query: 121 atagttgcggtccagaccaattgtcttgtcaagttctggattcatgggattatttcctcg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 316 atagttgcggtccagaccaattgtcttgtcaagttctggattcgtgggattatttcctcg 375
Query: 181 tgattaaatttagaaacctttagaacaatggcggatattcacaagacttccttcatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgattaaatttagaaacctttagaacaatggcggatattcacaagacttccttcatttct 435
Query: 241 ggacatgcactctgttattttgttattgttacccacggagcaaggtgcatagagcaagat 300
|||||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 436 ggacatgcactctgccagtttgtcattgttacctacggagcaaggtgcatagagcaagat 495
Query: 301 gcggcttgttcaaggttcctatctcctcaaaaaagcccctcctctttgcattgaaa 356
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 496 gcggcttgttcaaggttcctatctcctcaacaaagcccctcctctttgcattgaaa 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 751
Length adjustment: 9
Effective length of query: 347
Effective length of database: 742
Effective search space: 257474
Effective search space used: 257474
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
