Query= MSMg01no067_d24.b1 MSMg01no067_d24.b1 CHROMAT_FILE:
MSMg01no067_d24.b1 PHD_FILE: MSMg01no067_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:18 2005
(153 letters)
>mm_chr14_32279270_32279824
Length = 555
Score = 253 bits (131), Expect = 3e-72
Identities = 146/151 (96%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 5 gaattccagagctgcttgacatgatcctgtctcag-aaagagagtgacacaggggtgtgg 63
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 355 gaattccagagctgcttgacatgatcctgtctcagaaaagagagcgacacaggggtgtgg 296
Query: 64 ggatgggaatccagagagcagacacaaagagacttagggggaaaaa-tccaacacagatt 122
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 295 ggatgggaatccagagagcagacacgaagagacttagggggaaaaaatccaacacacatt 236
Query: 123 aactcatttccctgtacttcacaaagccagt 153
|||||||||||||||||||||||||||||||
Sbjct: 235 aactcatttccctgtacttcacaaagccagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 555
Length adjustment: 8
Effective length of query: 145
Effective length of database: 547
Effective search space: 79315
Effective search space used: 79315
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_d24.g1 MSMg01no067_d24.g1 CHROMAT_FILE:
MSMg01no067_d24.g1 PHD_FILE: MSMg01no067_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:18 2005
(289 letters)
>mm_chr14_32180713_32181401
Length = 689
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Plus
Query: 1 agtccctgtgacccatatggtggagggggagaaatgactcaggttaccctctgacttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtccctgtgacccatatggtggagggggagaaatgactcaggttaccctctgacttcca 260
Query: 61 tggtgggtgtgcagacacacaaaccactgttaacaaccctttataaaagtctgagaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtgggtgtgcagacacacaaaccactgttaacaaccctttataaaagtctgagaaaaa 320
Query: 121 tccctaccaaatcactgattagcgaaaggaaaataagatgagtcattagggggactttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctaccaaatcactgattagcgaaaggaaaataagatgagtcattagggggactttaa 380
Query: 181 gaagctagtttaacatgcctaaggtttatttagttctacattaggggtgggtaatgttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagctagtttaacatgcctaaggtttatttagttctacattaggggtgggtaatgttaa 440
Query: 241 taatgtgtttatatgcttttttgtatcttaaaaagacaaagctaatc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatgtgtttatatgcttttttgtatcttaaaaagacaaagctaatc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
