Query= MSMg01no067_e23.b1 MSMg01no067_e23.b1 CHROMAT_FILE:
MSMg01no067_e23.b1 PHD_FILE: MSMg01no067_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:22 2005
(233 letters)
>mm_chr14_111515220_111515851
Length = 632
Score = 398 bits (206), Expect = e-115
Identities = 226/238 (94%), Gaps = 11/238 (4%)
Strand = Plus / Plus
Query: 1 tttaaaaacacattcctacttttactcagtagattataaaaaatatgaggtacccttgaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaaaacacatttctacttttactcagtagattataaaaaatatgaggtacccttgaa 260
Query: 61 accttaactctcacttactactaatgtctgctgtgcttaattatcacgtttcaagggcta 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 accttaactctcacttactactaatgtctgct-tgcttaattatcacgtttcaagggcta 319
Query: 121 ttgtgcttctgtgctttcaaagtgagccttgaggttcatggtttagatagagtgtttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgtgcttctgtgctttcaaagtgagccttgaggttcatggtttagatagagtgtttgtc 379
Query: 181 tctgatgtttcctcta-----tttttttgcagttattctctactgttaggtgactgaa 233
|||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 380 tctgatgtttcctctaaagaatt-----gcagttattctctactgttaggtgactgaa 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 632
Length adjustment: 9
Effective length of query: 224
Effective length of database: 623
Effective search space: 139552
Effective search space used: 139552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_e23.g1 MSMg01no067_e23.g1 CHROMAT_FILE:
MSMg01no067_e23.g1 PHD_FILE: MSMg01no067_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:23 2005
(526 letters)
>mm_chr14_111646642_111647568
Length = 927
Score = 996 bits (515), Expect = 0.0
Identities = 524/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Minus
Query: 1 tcattttatagtactagactgtgaataggatgtgagttcatttcctttaaatttcaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcattttatagtactagactgtgaataggatgtgagttcatttcctttaaatttcaatta 668
Query: 61 cacaatactgtctttaaataaatatcatttatatcatcatttattacattgattaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cacaatactgtctttaaataaatatcatttatatcatcatttattacattgattaatctt 608
Query: 121 gagagatatataaaaattaacatacactaatacattaacataatcataaaactgtgtttt 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 607 gagagatatataaaaattaacatacactaatatattaacataatcataaaactgtgtttt 548
Query: 181 gcgtacatatattacggtagtattgaagattgtcactacacctgtattaatactgcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gcgtacatatattacggtagtattgaagattgtcactacacctgtattaatactgcatca 488
Query: 241 aaaaccaagacacagttacatttctgcttttggtttgaaatatacatttttga-tttaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 aaaaccaagacacagttacatttctgcttttggtttgaaatatacatttttgattttaga 428
Query: 300 atacttaaggcttttgggtatgtatattaacatgtgaatctagattattgttagaccaac 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atatttaaggcttttgggtatgtatattaacatgtgaatctagattattgttagaccaac 368
Query: 360 aagattttctaaatattcattgagctagaagtttaatcttcagaaaatatatataaatga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aagattttctaaatattcattgagctagaagtttaatcttcagaaaatatatataaatga 308
Query: 420 gaaatgtaataatttaggccgatgtgaaatgaaactaatcagttgaaaaaatcacttaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaaatgtaataatttaggccgatgtgaaatgaaactaatcagttgaaaaaatcacttaga 248
Query: 480 atcatctaaattatatacccattttaggattaaaacacctctaatga 526
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atcatctaaattatatacccattttaggattaaaacacctctaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 927
Length adjustment: 10
Effective length of query: 516
Effective length of database: 917
Effective search space: 473172
Effective search space used: 473172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
