Query= MSMg01no067_g11.b1 MSMg01no067_g11.b1 CHROMAT_FILE:
MSMg01no067_g11.b1 PHD_FILE: MSMg01no067_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:30 2005
(236 letters)
>mm_chr14_95595277_95595912
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%)
Strand = Plus / Plus
Query: 1 ggcagcctatataacggacatggaagaaagaatctttttgtctttgccttcttgatctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcagcctatataacggacatggaagaaagaatctttttgtctttgccttcttgatctcc 260
Query: 61 ctctcactggcaagtccattcctctactgtcattagaccctacattataaggattctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctcactggcaagtccattcctctactgtcattagaccctacattataaggattctggt 320
Query: 121 gtatagtgaagagcaagtgtaataaccaagatcatagcctgaacaactgcttgattctta 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gtatagtgaagagcaagtgtaataaccaatatcatagcctgaacaactgcttgattctta 380
Query: 181 gacgttccactgttataaaagctcatccaaaagctgtaagttatatatatgaatat 236
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacgttccactgttagaaaagctcatccaaaagctgtaagttatatatatgaatat 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_g11.g1 MSMg01no067_g11.g1 CHROMAT_FILE:
MSMg01no067_g11.g1 PHD_FILE: MSMg01no067_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:30 2005
(422 letters)
>mm_chr14_95707332_95708153
Length = 822
Score = 779 bits (403), Expect = 0.0
Identities = 418/423 (98%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 1 aactgatgaatttcatgaaagacgtaatgaacaatgaagtgatacaggtccagatgaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 462 aactgatgaatttcatgaaagacgtaatgaacaatgaagtgatacaggtgaagatgaaga 403
Query: 61 atgattgtagagataccatgacagacagtggggaattaaaaccatcagggtgtactgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atgattgtagagataccatgacagacagtggggaattaaaaccatcagggtgtactgccc 343
Query: 121 agaattaagtatgtttgcatttaacaatttagattaactgagttattcttatcaatacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agaattaagtatgtttgcatttaacaatttagattaactgagttattcttatcaatacca 283
Query: 181 tttacattttactgaaaataaaagctaagggggtggattaaatggaatgagtaaaaggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tttacattttactgaaaataaaagctaagggggtggattaaatggaatgagtaaaaggta 223
Query: 241 ggcacaaaactatcctggctggtatttaaataatattttttgat-aaaaatcatcttata 299
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 222 ggcacaaaactatcctggctggtatttaaataatattttttgataaaaaaacatcttata 163
Query: 300 aatatgcagacaagccttccgtagatagtcagttattaagtttatgggaaataaattgaa 359
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 aatatgtagacaagccttccgtagatagtcagttattaagtttatgggaaataaattgaa 103
Query: 360 cctgaaactaagcatgtctgtgaattaaaagccagcttggacagcctgtagtgagttttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 cctgaaactaagcatgtctgtgaattaaaagccagcttggacagcctgtagtgagttttg 43
Query: 420 aga 422
|||
Sbjct: 42 aga 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
