Query= MSMg01no068_i15.b1 MSMg01no068_i15.b1 CHROMAT_FILE:
MSMg01no068_i15.b1 PHD_FILE: MSMg01no068_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:00 2005
(229 letters)
>mm_chr14_118829302_118829930
Length = 629
Score = 383 bits (198), Expect = e-111
Identities = 221/229 (96%)
Strand = Plus / Plus
Query: 1 aagctggatgncacaacttaaaatatttaaatttcctcccaattatgtaggaagaaaagg 60
|||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 201 aagctggatgtcacaacttaaaatatttaaatttcatgtcaattatgtaggaagaaaagg 260
Query: 61 ttcggtacctagggaaagactcacgctggaagctgtgtgattggtaaccacctggttcta 120
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ttcggtacctagggaaagtctcacgctggaagctgtgtgattggtagccacctggttcta 320
Query: 121 gaatatgactttgatgcttgtgttttgaaacttgttcttgtagtttgttaaaccatgcca 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 gaatatgactttgatgcttgtgttttgaaacttgttcttgtagtttggcaaaccatgcca 380
Query: 181 aaagtaaccaacttaacacagcaaacaattcttctctagtttttgtagg 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagtaaccaacttaacacagcaaacaattcttctctagtttttgtagg 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_i15.g1 MSMg01no068_i15.g1 CHROMAT_FILE:
MSMg01no068_i15.g1 PHD_FILE: MSMg01no068_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:00 2005
(284 letters)
>mm_chr14_118969826_118970510
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 1 tctcgggcccaaagactagtcgacatttaaaaataggatttctgca-ttttttttaatct 59
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 485 tctcgggcccaaagactagtcgacatttaaaaataggatttctgcatttttttttaatct 426
Query: 60 ataatgttttgggggcttcttgttatagcatattttcctgtaatcacttatggctagtgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ataatgttttgggggcttcttgttatagcatattttcctgtaatcacttatggctagtgt 366
Query: 120 ttatgaacaataattgaaacttacaaagtaagtgaaaaaagccagactgcatacagttgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttatgaacaataattgaaacttacaaagtaagtgaaaaaagccagactgcatacagttgt 306
Query: 180 caaaatatcttcttttgctaatatcagtattttctttaactttgttatttatttgtttat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caaaatatcttcttttgctaatatcagtattttctttaactttgttatttatttgtttat 246
Query: 240 ttttggtggttgccagggatgaaactgggcatgctaagcaagcag 284
||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 245 ttttggtgggtgccagggatgaaactgggcgtgctaagcaagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
