Query= MSMg01no069_b22.b1 MSMg01no069_b22.b1 CHROMAT_FILE:
MSMg01no069_b22.b1 PHD_FILE: MSMg01no069_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:46 2005
(288 letters)
>mm_chr14_55179051_55179738
Length = 688
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 1 cgaaactctgtctcaagaaaacaaaacaaacaaacaaaaaaaaa-tcaaagaacaaacaa 59
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 cgaaactctgtctcaagaaaacaaaacaaacaaacaaaaaaaaaatcaaagaacaaacaa 259
Query: 60 aacaaaacaacaacaacaacaataacaacaaaacccagatgttctacagcacccacgaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aacaaaacaacaacaacaacaataacaacaaaacccagatgttctacagcacccacgaag 319
Query: 120 accggccagacttagtgactcccaataaactaaatcgccaacaaagcagattacaataac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 accggccagacttagtgactcccaataaactaaatcgccaacaaagcagattacaataac 379
Query: 180 aactgataacaagaacaagctgccttcaggatggcttattaaatcaattgttcagagacc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aactgataacaagaacaagctgccttcaggatggcttattaaatcaattgttcagagacc 439
Query: 240 gttcaaagcatgattcgttccacgctaagagtacctgcattcgtgatgg 288
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 gttcaaagcatgagtcgttccacgctaagagtacctgcattcgtgatgg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_b22.g1 MSMg01no069_b22.g1 CHROMAT_FILE:
MSMg01no069_b22.g1 PHD_FILE: MSMg01no069_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:46 2005
(197 letters)
>mm_chr14_55336434_55337030
Length = 597
Score = 373 bits (193), Expect = e-108
Identities = 196/197 (99%)
Strand = Plus / Minus
Query: 1 atgagactgtctcaaaaattttttataaagcgggcaagaagagttgcagccgcaatggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgagactgtctcaaaaattttttataaagcgggcaagaagagttgcagccgcaatggtg 338
Query: 61 cctgccattgagcccgacaatctgggcccacatgatagaaagagaaaatcagcccctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cctgccattgagcccgacaatctgggcccacatgatagaaagagaaaatcagcccctgaa 278
Query: 121 tgtttactttgacctctccaatgctctgtgacacttacttaaatataatgtggttttttt 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 277 tgtttactttgacctctccaatgctctgtgacacttacataaatataatgtggttttttt 218
Query: 181 aatatttaaaaaagtag 197
|||||||||||||||||
Sbjct: 217 aatatttaaaaaagtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space: 111321
Effective search space used: 111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
