Query= MSMg01no070_k05.b1 MSMg01no070_k05.b1 CHROMAT_FILE:
MSMg01no070_k05.b1 PHD_FILE: MSMg01no070_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:47 2005
(503 letters)
>mm_chr14_116350254_116351157
Length = 904
Score = 940 bits (486), Expect = 0.0
Identities = 495/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Minus
Query: 7 gaattctatac-agccacttatttattaaataattgttttagttggaaggtctctcaata 65
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gaattctatacaagccatttatttattaaataattgttttagttggaaggtctctcaata 645
Query: 66 ttaatatatctctattagacacttgtgtctgataccaaaactttaattgtttgttagatt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ttaatatatctctattagacacttgtgtctgataccaaaactttaattgtttgttagatt 585
Query: 126 ttctttactttagtagcattactttagcatgctgtgcacatgaggtgagagtcctttcac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttctttactttagtagcattactttagcatgctgtgcacatgaggtgagagtcctttcac 525
Query: 186 tttgaaagggatatcatatcttcctcacaactcccacttttcttttgctgttatcttgta 245
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 524 tttgaaagggatatcatatcttcctcacaactcccacttttcttttgctgttgtcttgta 465
Query: 246 gcaatcatttgtttattcagtatttgttacatggcattagaataaacaaggcatgttatc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gcaatcatttgtttattcagtatttgttacatggcattagaataaacaaggcatgttatc 405
Query: 306 tacctgtgaatactcatgacatgtgtagaagatattattacccttgttttacaaaatgaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tacctgtgaatactcatgacatgtgtagaagatattattacccttgttttacaaaatgaa 345
Query: 366 agtattacacaggaatccatttgcttaagaatatttaatgattgtgagtaagagatatat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtattacacaggaatccatttgcttaagaatatttaatgattgtgagtaagagatatat 285
Query: 426 tctggatataggctgacgaaatatgtaattgtatctcaaagcccatttgggtcaatgtaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tctggatataggctgacgaaatatgtaattgtatctcaaagcccatttgggtcaatgtaa 225
Query: 486 aacctgttggttacctca 503
||||||||||||||||||
Sbjct: 224 aacctgttggttacctca 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 904
Length adjustment: 10
Effective length of query: 493
Effective length of database: 894
Effective search space: 440742
Effective search space used: 440742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_k05.g1 MSMg01no070_k05.g1 CHROMAT_FILE:
MSMg01no070_k05.g1 PHD_FILE: MSMg01no070_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:47 2005
(374 letters)
>mm_chr14_116184959_116185732
Length = 774
Score = 630 bits (326), Expect = 0.0
Identities = 362/374 (96%)
Strand = Plus / Plus
Query: 1 ttaggaaaataaagtggatatgggaaaaagttagcaaagaatgtgagtgtctaaaaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggaaaataaagtggatatgggaaaaagttagcaaagaatgtgagtgtctaaaaaagg 260
Query: 61 aagcaagacatcatcagatcatggtttttgctatatttgttatataagtcttcttcataa 120
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 261 aagcaagacatcatcagatcatggtttttgctatagctgttatataagtcttctttataa 320
Query: 121 ttggattcattgttagataattctttacactaatattgtgtgtttaaataacattgtaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 ttggattcattgttagataattctttacactaatattgtgtgtttaaataacgttgtaat 380
Query: 181 aactatgtaataaagtagatcatagtaatcggatgcattcatttttaatgatttcaccat 240
| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 agctacgtaataaagtagatcatagtaatcagatgcattcatttttaatgatttcaccat 440
Query: 241 tattttcaaattaattggtttttatgttttattcttaaaatgacagtggcacacagatat 300
||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 441 tattttcaaattaattggtttttatgttttattctgaaaacgacaatggcacacagatat 500
Query: 301 cttgtaattattttagaagcaaggaagctgaattatttattcaaggaattcaatcatacc 360
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 501 cttgtaattattttagaagcaaggaagctgaattagttattcaaggaattcactcatacc 560
Query: 361 catgttttctagca 374
||||||||||||||
Sbjct: 561 catgttttctagca 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
