Query= MSMg01no071_f14.b1 MSMg01no071_f14.b1 CHROMAT_FILE:
MSMg01no071_f14.b1 PHD_FILE: MSMg01no071_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:43 2005
(364 letters)
>mm_chr14_109702594_109703358
Length = 765
Score = 613 bits (317), Expect = e-180
Identities = 350/363 (96%), Gaps = 5/363 (1%)
Strand = Plus / Minus
Query: 5 gaattctctaaactt---ccaaaatactatccttattaaaagaatgacagcgactattat 61
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaattctctaaacttaaa--aaaatactatccttattaaaagaatgacagcgactattat 508
Query: 62 cagaactgcacatagtttacagtattataagatgagctagcgtcacaatctgagttatgg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 507 cagaactgcacatagtttacagtattataagatgagctagcgtcacaatctgagtcatgg 448
Query: 122 agaaatttgatagtcaggtcagttattttctgtcatgggaataattctcttatatatggt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agaaatttgatagtcaggtcagttattttctgtcatgggaataattctcttatatatggt 388
Query: 182 gtaatgaaattcttgactctcattctaggaataatttcttttttcagatatcacacatca 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 387 gtaatgaaattcttgactctcattctaggaataatttcttttttcagatatcacacgcca 328
Query: 242 ttttacccatcttactgaccttgccaacagaccctgtagtcctttcccactctctcctca 301
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tttttcccatcttcctgaccttgccaacagaccctgtagtcctttcccactctctcctca 268
Query: 302 tggcttttatttctcttttaaaatcaaactcatgactaatgataataagaaaaatgataa 361
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 267 tggcttttatttcttttttaaaatcaaactcatgaaaaatgataataagaaaaatgataa 208
Query: 362 taa 364
|||
Sbjct: 207 taa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 765
Length adjustment: 9
Effective length of query: 355
Effective length of database: 756
Effective search space: 268380
Effective search space used: 268380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no071_f14.g1 MSMg01no071_f14.g1 CHROMAT_FILE:
MSMg01no071_f14.g1 PHD_FILE: MSMg01no071_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:43 2005
(144 letters)
>mm_chr14_109544656_109545199
Length = 544
Score = 213 bits (110), Expect = 4e-60
Identities = 132/144 (91%), Gaps = 8/144 (5%)
Strand = Plus / Plus
Query: 1 tttgaaatgcaaatatgaaatgttccaattactgctataagaaatataaataaaccctgt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaaatgcaaatttgaaatgttccaattactgctataagaaatataaataaaccctgt 260
Query: 61 ggtcctgagaaagcgactttcatctctgtaatctgtctcttgagtgtagacactaatgat 120
||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 261 ggtcctgagaaagcgacttccatctctgtaatctgtctcttgagtgcagacac------- 313
Query: 121 gaaatgatgtattcccagaggctc 144
|||||||| ||||||||||||||
Sbjct: 314 -aaatgatgcattcccagaggctc 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
