Query= MSMg01no072_i23.b1 MSMg01no072_i23.b1 CHROMAT_FILE:
MSMg01no072_i23.b1 PHD_FILE: MSMg01no072_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:20 2005
(498 letters)
>mm_chr14_115735744_115736642
Length = 899
Score = 942 bits (487), Expect = 0.0
Identities = 496/499 (99%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 1 cattctagcagtaccga-tatttttcagagagatgggggaatgatacagtggatgtgggt 59
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattctagcagtaaagaatatttttcagagagatgggggaatgatacagtggatgtgggt 260
Query: 60 cttcactttgcaatcctggtgccgggctcaaggcatgcagaacgtaacctaagatgtagc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcactttgcaatcctggtgccgggctcaaggcatgcagaacgtaacctaagatgtagc 320
Query: 120 ctccagcccaggtgagaaatgtctcaggttggggccaagactgagtttcccaaacctctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccagcccaggtgagaaatgtctcaggttggggccaagactgagtttcccaaacctctg 380
Query: 180 gacatcactgctgggaacctcaaggagttgggaaaggggctggagcttgagattagcctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacatcactgctgggaacctcaaggagttgggaaaggggctggagcttgagattagcctg 440
Query: 240 gatgggtgaggagtattgggatctcagagggtccttccgagggaaacttaggcagcttgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgggtgaggagtattgggatctcagagggtccttccgagggaaacttaggcagcttgg 500
Query: 300 taacaaaggcttccctccacagaagttcttgatgagagagacagtccttgttcgtccaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taacaaaggcttccctccacagaagttcttgatgagagagacagtccttgttcgtccaaa 560
Query: 360 ctgttatattcatagtggaaaattggtatatacaacatactcagggtggaccagtgatta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgttatattcatagtggaaaattggtatatacaacatactcagggtggaccagtgatta 620
Query: 420 aatcccttttgcaggggggaatgtccgagaaggacattgcttcttggctaaaccctcagg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatcccttttgcaggggggaatgtccgagaaggacattgcttcttggctaaaccctcagg 680
Query: 480 gccattaggtacctcatta 498
|||||||||||||||||||
Sbjct: 681 gccattaggtacctcatta 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 899
Length adjustment: 10
Effective length of query: 488
Effective length of database: 889
Effective search space: 433832
Effective search space used: 433832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_i23.g1 MSMg01no072_i23.g1 CHROMAT_FILE:
MSMg01no072_i23.g1 PHD_FILE: MSMg01no072_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:21 2005
(477 letters)
>mm_chr14_115915906_115916782
Length = 877
Score = 783 bits (405), Expect = 0.0
Identities = 408/409 (99%)
Strand = Plus / Minus
Query: 69 gagtttttattggtttagtgtctgtttcttatgggctttttgtgtttttttgtggttggt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gagtttttattggtttagtgtctgtttcttatgggctttttgtgtttttttgtggttggt 818
Query: 129 tatattttttctttgcatttttctatagaaagacacaaaatgggtttggaattggtggat 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tatattttttctttgcatttttctatagaaagacacaaaatgggtttggaattggtggat 758
Query: 189 ggaaggtatggaacatctgggagaagtagtgaaatgtgaaaccatgatcagaatatatta 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ggaaggtatggaacatctgggagaagtagtgaaatgtgaaaccatgatcagaatatatta 698
Query: 249 catgaaaacattcaataaaatttccatgtgagggagataaactctatcttctagtagctg 308
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tatgaaaacattcaataaaatttccatgtgagggagataaactctatcttctagtagctg 638
Query: 309 tacctcctatcaattttagtcatttttctaaattcttaagtataataaaagaaaacagga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tacctcctatcaattttagtcatttttctaaattcttaagtataataaaagaaaacagga 578
Query: 369 ttaattcaaataagtccatggttttggtggcaacagaaagactccagtattgttgttctt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttaattcaaataagtccatggttttggtggcaacagaaagactccagtattgttgttctt 518
Query: 429 ccaatttgaccatacagtgagatcaccatttaacacagcttccacataa 477
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ccaatttgaccatacagtgagatcaccatttaacacagcttccacataa 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
