Query= MSMg01no073_f24.b1 MSMg01no073_f24.b1 CHROMAT_FILE:
MSMg01no073_f24.b1 PHD_FILE: MSMg01no073_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:25 2005
(654 letters)
>mm_chr14_25434767_25435821
Length = 1055
Score = 1178 bits (609), Expect = 0.0
Identities = 639/649 (98%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 7 gaattcctatttgttc-accagattctcagcctccacgtccggccttcctagccaagcct 65
|||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 855 gaattcctatttgtccaaacagattctcagcctccacgtccggccttcctagtgaagcct 796
Query: 66 gccagggatggagaagagactggggaacttcaggcaggcatagattccacagactcacac 125
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 gccagggatggaaaagagactggggaacttcaggcaggcatagattccacagactcacac 736
Query: 126 actggctatatcattctgtgagcctagcttaaaatcattgtccatgttcatagcactatc 185
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 735 actggctatatcattctatgagcctagcttaaaatcattgtccatgttcatagcactctc 676
Query: 186 ggaagacataagctgattatcataagtactgaacaactaatatttgctgacactggggtg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ggaagacataagctgattatcataagtactgaacaactaatatttgctgacactggggtg 616
Query: 246 aaatattaggtgcaaggaactctgtgaagaatgcaagagaagacaatgtttcccacccat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aaatattaggtgcaaggaactctgtgaagaatgcaagagaagacaatgtttcccacccat 556
Query: 306 tcttacaataacacccagacagcagtcatcctaaggctgcatttaagcctctctggtgct 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcttacaataacacccagacagcagtcatcctaaggctgcatttaagcctctctggtgct 496
Query: 366 aatgtgggaaagttatcttataggcccacgcagctgtcagaagtatctcttcctcagacg 425
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatgtgggaaagctatcttataggcccacgcagctgtcagaagtatctcttcctcagacg 436
Query: 426 gcatcaatacagtaggcaggaggccagctccttgttcatcctcaaatccaaacctctctc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcatcaatacagtaggcaggaggccagctccttgttcatcctcaaatccaaacctctctc 376
Query: 486 tcaacagggaccatattgctatggagaagaaaacaagaagctatctgttttttcaaacat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcaacagggaccatattgctatggagaagaaaacaagaagctatctgttttttcaaacat 316
Query: 546 agatgtggaattaggaagtgagaaagaaatggaatctggactaatccagtggactggcat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agatgtggaattaggaagtgagaaagaaatggaatctggactaatccagtggactggcat 256
Query: 606 gatctgctggggcagttgtctcaaacatatcagttccagctgctgaaac 654
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 255 gatctgctggggcagttgtctcgaacatatcagttccagctgctgaaac 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_f24.g1 MSMg01no073_f24.g1 CHROMAT_FILE:
MSMg01no073_f24.g1 PHD_FILE: MSMg01no073_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:25 2005
(545 letters)
>mm_chr14_25369299_25370243
Length = 945
Score = 1023 bits (529), Expect = 0.0
Identities = 541/545 (99%)
Strand = Plus / Plus
Query: 1 acttggtagactaggctggagttgaacttacagttatctcgcttctgtctctcagagacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttggtagactaggctggagttgaacttacagttatctcgcttctgtctctcagagacc 260
Query: 61 agggattaaaggtgtgtactaccaaatctggtaacattcactcctgagggagggaccatg 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggactaaaggtgtgtactaccaaatctggtaacattcactcctgagggagggaccatg 320
Query: 121 gtgaactaagtaattctcacgaaggcctgtgtttttaaagggtacaccccctcttaatac 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaactaagtaattctcatgaaggcctgtgtttttaaagggtacaccccctcttaatac 380
Query: 181 caccacattaaggaccagcctcgcaatttatgaacccttgggagacatgccagaccctcc 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 caccacattaaggaccagcctcgcaattcatgaacccttgggagacatgccagaccctcc 440
Query: 241 cctctccaattcatggcacaatataccctctctatatgtctctgtatgtgtatatattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctctccaattcatggcacaatataccctctctatatgtctctgtatgtgtatatattcc 500
Query: 301 tcctctatcttctactcttattggtgccatgaatttggacatggtcatggcttcctttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcctctatcttctactcttattggtgccatgaatttggacatggtcatggcttcctttcc 560
Query: 361 ttttgggtcacaaaatagttttatttgtagctctgtagaatgggctgttttgtccttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttgggtcacaaaatagttttatttgtagctctgtagaatgggctgttttgtccttctg 620
Query: 421 tagactaactgtactcttgcttaatgactttctgtcctttagcccatttgcttttatctc 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 tagactaactgtactcttgcttaatgactttctgtcctttagtccatttgcttttatctc 680
Query: 481 tttttataggatgtcttcattcaaactgcctatatgtaaatataattactgctttcattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttttataggatgtcttcattcaaactgcctatatgtaaatataattactgctttcattc 740
Query: 541 taaca 545
|||||
Sbjct: 741 taaca 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
