Query= MSMg01no073_j06.b1 MSMg01no073_j06.b1 CHROMAT_FILE:
MSMg01no073_j06.b1 PHD_FILE: MSMg01no073_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:41 2005
(490 letters)
>mm_chr14_71106464_71107353
Length = 890
Score = 924 bits (478), Expect = 0.0
Identities = 484/486 (99%)
Strand = Plus / Minus
Query: 5 gaattcaccaacagtcctgattgcctgagcaagtgccagctgctcctcgagagaggaagt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gaattcaccaacagccctgattgcctgagcaagtgccagctgctcctcgagagaggaagt 631
Query: 65 gtacgtaagagttacgtcctaaagggtagcagaattaagaaaaatgccctgcttctaact 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gtacgtaagagttaagtcctaaagggtagcagaattaagaaaaatgccctgcttctaact 571
Query: 125 ttagggacagtggggtagccattgctgagtcttgaggtatccgatgtacttcactcttga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttagggacagtggggtagccattgctgagtcttgaggtatccgatgtacttcactcttga 511
Query: 185 gcactgtcatagccaggttaacgatggcctcctcagtaagcaagctcagtaagctcccac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gcactgtcatagccaggttaacgatggcctcctcagtaagcaagctcagtaagctcccac 451
Query: 245 acacttctgttctgcaccaggctcctagaatgcattctctattcttacgcttcagtgcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acacttctgttctgcaccaggctcctagaatgcattctctattcttacgcttcagtgcca 391
Query: 305 cctcctgtcctttataggggcaagggggtctataagtccttgttttataaacttgattgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cctcctgtcctttataggggcaagggggtctataagtccttgttttataaacttgattgt 331
Query: 365 ctcctattgtttttttcctcagttctgcttactagttacctaacagagctaaggaaacat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctcctattgtttttttcctcagttctgcttactagttacctaacagagctaaggaaacat 271
Query: 425 gaccatgacagtgaaatgaaaggaaattaaagtgttttcttttgttagtttttgaggcag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaccatgacagtgaaatgaaaggaaattaaagtgttttcttttgttagtttttgaggcag 211
Query: 485 agtctc 490
||||||
Sbjct: 210 agtctc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_j06.g1 MSMg01no073_j06.g1 CHROMAT_FILE:
MSMg01no073_j06.g1 PHD_FILE: MSMg01no073_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:41 2005
(288 letters)
>mm_chr14_70985025_70985705
Length = 681
Score = 501 bits (259), Expect = e-146
Identities = 277/287 (96%), Gaps = 7/287 (2%)
Strand = Plus / Plus
Query: 1 tttgcattaagtcaccgatcacctagagcccagaaaggagtaagatgacaagtgaccatg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tttgcattaagtcaccgatcacctagagcccagaaaggagtaagatgagaagtgaccatg 260
Query: 61 tcccacagctgcccctggctctaccatcccatgggaggcaggaggacaggactggaaaac 120
||||||||||||||||||||||||||| ||||||| |||||| |||||||||||
Sbjct: 261 tcccacagctgcccctggctctaccat-------gaggcagaaggacaagactggaaaac 313
Query: 121 ctgtgcttttcctgatactggaaagggtaccaaggcagtcccgccccttgccttgctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctgtgcttttcctgatactggaaagggtaccaaggcagtcccgccccttgccttgctctg 373
Query: 181 tcctttcctatcacaccctcatccttaccctgacaagcacagagaacaggctcctgcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcctttcctatcacaccctcatccttaccctgacaagcacagagaacaggctcctgcagc 433
Query: 241 caggggccaggctgatgtagggatccaggaggtactcatggatatgg 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 caggggccaggctgatgtagggatccaggaggtactcatggatatgg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 681
Length adjustment: 9
Effective length of query: 279
Effective length of database: 672
Effective search space: 187488
Effective search space used: 187488
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
