Query= MSMg01no073_k08.b1 MSMg01no073_k08.b1 CHROMAT_FILE:
MSMg01no073_k08.b1 PHD_FILE: MSMg01no073_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:46 2005
(534 letters)
>mm_chr14_85056382_85057311
Length = 930
Score = 853 bits (441), Expect = 0.0
Identities = 455/461 (98%), Gaps = 4/461 (0%)
Strand = Plus / Minus
Query: 74 gcctacttgaacttccacataaatctgcttcctagggtctacttggagtttatttgcata 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 gcctacttgaacttccacataaatctgcttcctagggtctacttggagtttatttgcata 871
Query: 134 gattagagctcatcttcttgctgctgagtaacgtcttcacacactcattcttcttcttag 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gattagagctcatcttcttgctgctgagtaacgtcttcacacactcattcttcttcttag 811
Query: 194 gctgttagtgtaaacttgtttgatcaatgtttatgcattcccaatgtaatgaaaataata 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gctgttagtgtaaacttgtttgatcaatgtttatgcattcccaatgtaatgaaaataata 751
Query: 254 tttgatattttaaatatataggcatcatttcaagtcctttacataaattacctcatttca 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tttgatattttaaatatataggcatcatttcaagtcctttacataaattacctcatttca 691
Query: 314 gctgtgtgacaatattttttttaacgaacatgataatcatgataattttattcacatgtt 373
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 690 gctgtgtgacaata-tttttttaacgaacatgataatc---ataattttattcacatgtt 635
Query: 374 atgagtaaagaaacccagacaaaaaaggagtattagaagacatcttctgaatactatact 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 atgagtaaagaaacccagacaaaaaaggagtattagaagacatcttctgaatactatact 575
Query: 434 gttaactaatgtgctgcacagaccttcctttgggtaacaggaaagttgcactgtcacatt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gttaactaatgtgctgcacagaccttcctttgggtaacaggaaagttgcactgtcacatt 515
Query: 494 atattgctctctgaaatttctggtacaagtgaggtgaggtt 534
||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 514 atattgcactctgaaatttctggtagaagtgaggtgaggtt 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 930
Length adjustment: 10
Effective length of query: 524
Effective length of database: 920
Effective search space: 482080
Effective search space used: 482080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_k08.g1 MSMg01no073_k08.g1 CHROMAT_FILE:
MSMg01no073_k08.g1 PHD_FILE: MSMg01no073_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:46 2005
(548 letters)
>mm_chr14_84989151_84990098
Length = 948
Score = 1006 bits (520), Expect = 0.0
Identities = 542/550 (98%), Gaps = 2/550 (0%)
Strand = Plus / Plus
Query: 1 cagtaattagtgtagagatccactctgaagatcagtagtgtagatttctcctgaggactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtaattagtgtagagatccactctgaagatcagtagtgtagatttctcctgaggactg 260
Query: 61 tggaagtttacagtaggctttctgcaaggaaagaggtcaaagagaacaggatgatgatac 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 tggaagtttacagtaggctttctgcaaggaaaaaggtcaaagagaacaggatgatgatac 320
Query: 121 atgtggtcagggtttttcagaaatgaactgagaggtttttgaacaaattcatacaaatga 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtggttagggtttttcagaaatgaactgagaggtttttgaacaaattcatacaaatga 380
Query: 181 acatatagaaataaatgagtatatatggttttactcaaaccacataaaccacacatgcac 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatatagaattaaatgagtatatatggttttactcaaaccacataaaccacacatgcac 440
Query: 241 atatatgcatgcacacacattaattgttctttctagttctattgttgtaataaaacattc 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatatgcatgcacactcattaattgttctttctagttctattgttgtaataaaacattc 500
Query: 301 tgatcaaaagctacttaagggggaaatgatttatttaagttcagaattctaagtgacagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatcaaaagctacttaagggggaaatgatttatttaagttcagaattctaagtgacagt 560
Query: 361 ccagtacattggaaatgccagacaaaaggaactcaaacagctcaccccatcacattatgg 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 ccagtacattggaaatgccagacaaaaggaactcaaacatctcaccccatcacattatgg 620
Query: 421 tcaagagcagaacaaatgaatatatttatatatat--tatatatattatttatatataca 478
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 tcaagagcagaacaaatgaatatatttatatatatattatatatattatttatatataca 680
Query: 479 tatgtctgcatgtattatacatgcggagaagatcaattttatgacctcatgttggattag 538
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatgtctgcatgtattatacatgtggagaagatcaattttatgacctcatgttggattag 740
Query: 539 agatagcagt 548
||||||||||
Sbjct: 741 agatagcagt 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
