Query= MSMg01no074_p10.b1 MSMg01no074_p10.b1 CHROMAT_FILE:
MSMg01no074_p10.b1 PHD_FILE: MSMg01no074_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:30 2005
(653 letters)
>mm_chr14_118301846_118302898
Length = 1053
Score = 1143 bits (591), Expect = 0.0
Identities = 636/651 (97%), Gaps = 4/651 (0%)
Strand = Plus / Minus
Query: 5 gaattcactggacaccaacccagaagtaaggagaagcctgggatcttgcgctagtttctc 64
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 853 gaattcactggacatcaacccagaagtaaggagaagcctgggatcttgtgctagtttctc 794
Query: 65 tgtcttttgtcctcgggccactagcctgagtattgtgcttctgttctagtatttgaaaag 124
||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||
Sbjct: 793 tgtcttttgtcctcgggccactagcctgaatattgtgcttatgtcctagtatttgaaaag 734
Query: 125 gagagaggtc-aaacggggcaacataaaaatagctgcaagattcctcttcttgttgtcag 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 733 gagagaggtcaaaacggggcaacataaaaatagctgcaagattcctcttcttgctgtcag 674
Query: 184 tcctgtagtcaaatctgctcccggagcactgatcattgtgtagggaaatgaccgtcgcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tcctgtagtcaaatctgctcccggagcactgatcattgtgtagggaaatgaccgtcgcag 614
Query: 244 acatgtccctggtattcaccttcaagtgattcttttaaagagcaatttcagatgtatctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 acatgtccctggtattcaccttcaagtgattcttttaaagagcaatttcagatgtatctc 554
Query: 304 accttcatattcatttctgtcacctaatttgggttttcatgtcctctgctggctcgtctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 accttcatattcatttctgtcacctaatttgggttttcatgtcctctgctggctcgtctt 494
Query: 364 cccagcccggcttgattgtgttttaaaagcctttctgcagcagtcctgggcagtgatgtg 423
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cccagcccggcttgatcgtgttttaaaagcctttctgcagcagtcctgggcagtgatgtg 434
Query: 424 aggccacaggcaggcacttcaccctcagaagcgtgtccctcgttcctccgagtaccattg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aggccacaggcaggcacttcaccctcagaagcgtgtccctcgttcctccgagtaccattg 374
Query: 484 ttcctcgaggttattttcatccgcctcttagctgcatccttcctgaaggcattcacagga 543
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttcctcgaggtcattttcatccacctcttagctgcatccttcctgaaggcattcacagga 314
Query: 544 cttgcatctctcaccagcttctcagatgggcacacggggggatatcttgtcatctgcttg 603
||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 313 cttgcgtctctcaccagcttctcagatgggcacatggggg-atatcttgtcatctgcttg 255
Query: 604 ctctgtggctgggctttacagaagtt-ccttgtggacttagacaatgaagt 653
|||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 254 ctctgtggctgggctt-acagaagtttccttgtggacttagacaatgaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_p10.g1 MSMg01no074_p10.g1 CHROMAT_FILE:
MSMg01no074_p10.g1 PHD_FILE: MSMg01no074_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:30 2005
(585 letters)
>mm_chr14_118149349_118150335
Length = 987
Score = 1089 bits (563), Expect = 0.0
Identities = 581/587 (98%), Gaps = 2/587 (0%)
Strand = Plus / Plus
Query: 1 aggagtttcgattaaatttttcttttactgtatctattattccccc-tttttttcttcta 59
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 aggagtttcgattaaatttttcttttactgtatctattattcccccttttttttcttcta 260
Query: 60 catttgtagtaaggacttgaagctgtggttttagtctgctcagagaatattgcacttttc 119
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 261 catttgtagtaaggacttgaagctgtggttttagtctgttcagaaaatattgcacttttc 320
Query: 120 tttatgtgagaccacagccatgaatgataaagtgaacagaggggacaaaggtcaaagtca 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttatgtgagaacacagccatgaatgataaagtgaacagaggggacaaaggtcaaagtca 380
Query: 180 ctcagcaagctattcctttcagctctggttttgtttcagagcagaaataatccatcgtga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagcaagctattcctttcagctctggttttgtttcagagcagaaataatccatcgtga 440
Query: 240 agaatatttctgagaaggatttcacaacctttcctttgatttgccaatctaaaattagtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaatatttctgagaaggatttcacaacctttcctttgatttgccaatctaaaattagtt 500
Query: 300 tcagggaaccagaatcatgaaagtatttttctcacatattcatgacttaacccaataaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagggaaccagaatcatgaaagtatttttctcacatattcatgacttaacccaataaaa 560
Query: 360 cttagtgctcatgggaagtgttctttttttt-gtgcttgccttttacgggatgttaagat 418
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 cttagtgctcatgggaagtgttctttttttttgtgcttgccttttacgggatgttaagat 620
Query: 419 tttataatatgtaactcatcagtcacacaaagctaagcagaatggcctgaagacacggct 478
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 tttataatatgtaactcatcagtcacacaaagctaagcggaatggcctgaagacacggct 680
Query: 479 cagctgttaagcacccaaactgctcctgtggagaacctgtgtgcagttcctagcacccac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagctgttaagcacccaaactgctcctgtggagaacctgtgtgcagttcctagcacccac 740
Query: 539 aaacagctgacagccacctaaaattccaatttctagggaatccagtg 585
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaacagctgacagccacctaaaattccaatttctagggaatccagtg 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 987
Length adjustment: 10
Effective length of query: 575
Effective length of database: 977
Effective search space: 561775
Effective search space used: 561775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
