Query= MSMg01no076_b10.b1 MSMg01no076_b10.b1 CHROMAT_FILE:
MSMg01no076_b10.b1 PHD_FILE: MSMg01no076_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:56 2005
(367 letters)
>mm_chr14_73386162_73386928
Length = 767
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%)
Strand = Plus / Minus
Query: 5 gaattcaatgactatccgccagtttccatgtcagtctgaaatgtctgctagttgagtctg 64
|||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 567 gaattcaatgaccattcgccagtttccatgtcagtctgaaatgtctgctaggtgagtctg 508
Query: 65 atgtgttctttcactgagtatgtagagccgtagctgttaacatcagccaaagtcatttct 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 507 atgtgttctttcactgagtatgtagagctgtagctgttaacatcagccaaagtcatttct 448
Query: 125 ctcactatgtttgcacatgtaaaagtagagatgaactgaaatatttcatattagattctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctcactatgtttgcacatgtaaaagtagagatgaactgaaatatttcatattagattctc 388
Query: 185 atctccccatgatatcactgtatcagaccttggaaaaatgaagacgaaagtgtaacaccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atctccccatgatatcactgtatcagaccttggaaaaatgaagacgaaagtgtaacaccc 328
Query: 245 atgaagactacaacagccagagttttattatgtttggaaggagtcacttttgtttctaag 304
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 327 atgaagactacaacagccagagttttattaggtttggaaggagtgacttttgtttctaag 268
Query: 305 gcaaacaagctcttcctccagtccaatacgttttttggctcttctgacacaagcaaatga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gcaaacaagctcttcctccagtccaatacgttttttggctcttctgacacaagcaaatga 208
Query: 365 cta 367
|||
Sbjct: 207 cta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_b10.g1 MSMg01no076_b10.g1 CHROMAT_FILE:
MSMg01no076_b10.g1 PHD_FILE: MSMg01no076_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:56 2005
(325 letters)
>mm_chr14_73179651_73180380
Length = 730
Score = 534 bits (276), Expect = e-156
Identities = 315/334 (94%), Gaps = 13/334 (3%)
Strand = Plus / Plus
Query: 1 cactctaggaccagtctctattgttcgtatattttttctcttctac-accagtctcccta 59
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 201 cactctaggaccagtctctattgttcctatattttttctcttctacaaccagtctcccta 260
Query: 60 tttccttaaaaaa----atttttttttgccttcttttctttttcttgatacattcttggc 115
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttccttaaaaaaaaatatttttttttgccttcttttctttttcttgatacattcttggc 320
Query: 116 tattcatacggcttcttcattccttaagatggccactaaataggccatgctaaagcacac 175
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tattcatagggcttcttcattccttaagatggccaccaaataggccatgctaaagcacac 380
Query: 176 acatttgctggtaagtatctgaagcaccaactgctagtccccacaacaggacggctgagg 235
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatttgctgataagtatccgaagcaccaactgctagtccccacaacaggacggctgagg 440
Query: 236 ccaaatttt----atgcagtttctgcttcctggtaccttctatctagccactcaggctct 291
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaa----caggatgcagtttctgcttcctggtaccttctatctagccactcaggctct 496
Query: 292 tgagcatgaagggcataaaagaaaaatctcccag 325
||||||||||||||| ||||||||||||||||||
Sbjct: 497 tgagcatgaagggcagaaaagaaaaatctcccag 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 730
Length adjustment: 9
Effective length of query: 316
Effective length of database: 721
Effective search space: 227836
Effective search space used: 227836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
