Query= MSMg01no076_d23.b1 MSMg01no076_d23.b1 CHROMAT_FILE:
MSMg01no076_d23.b1 PHD_FILE: MSMg01no076_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:09 2005
(568 letters)
>mm_chr14_95756860_95757826
Length = 967
Score = 1035 bits (535), Expect = 0.0
Identities = 544/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Minus
Query: 4 ttaagtcttttgttcattgaaattcttgaaagaatctgtgagcagcagaatgctactcac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ttaagtcttttgttcattgaaattcttgaaagaatctgtgagcagcagaatgctactcac 487
Query: 64 catcagactaattttccctagagcctgtattctggcattatccttatcacaggaaggctt 123
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cattagactaa-tttccctagagcctgtattctggcattatccttatcacaggaaggctt 428
Query: 124 tacagaaatgagtatagtgtttttgtgaatccttgtgtacaactttaccacaagtcatgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tacagaaatgagtatagtgtttttgtgaatccttgtgtacaactttaccacaagtcatgc 368
Query: 184 actgggcaacaagtaagactcaagtgaatgagaaaagagtcaaagagagaagaaatgctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 actgggcaacaagtaagactcaagtgaatgagaaaagagtcaaagagagaagaaatgctt 308
Query: 244 ttaaatgcaaatatcccatccagtcagtattttttacatgtacttgaagaaaatgagttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttaaatgcaaatatcccatccagtcagtattttttacatgtacttgaagaaaatgagttg 248
Query: 304 taatttcgagatctacgcaggttgttctgtgacagttttctgtgataaattaataatttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 taatttcgagatctacgcaggttgttctgtgacagttttctgtgataaattaataatttt 188
Query: 364 aaatatgacacccagaaacattctgtctcatttcttttctaaaagagctacttaaaattt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aaatatgacacccagaaacattctgtctcatttcttttctaaaagagctacttaaaattt 128
Query: 424 tatgcaagagaatctttcagaatatagttattgtgaacaatttactacaaaataatattt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tatgcaagagaatctttcagaatatagttattgtgaacaatttactacaaaataatattt 68
Query: 484 ggcattgtaagattagattatctattacttatcgagtattttatttacctattatatcat 543
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ggtattgtaagattagattatctattacttatcgagtattttatttacctattatatcat 8
Query: 544 tcgaaat 550
|||||||
Sbjct: 7 tcgaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 967
Length adjustment: 10
Effective length of query: 558
Effective length of database: 957
Effective search space: 534006
Effective search space used: 534006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_d23.g1 MSMg01no076_d23.g1 CHROMAT_FILE:
MSMg01no076_d23.g1 PHD_FILE: MSMg01no076_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:09 2005
(456 letters)
>mm_chr14_95665288_95666143
Length = 856
Score = 843 bits (436), Expect = 0.0
Identities = 448/452 (99%)
Strand = Plus / Plus
Query: 5 tctaactaggtatataattattgttaaagtttccatgggaaaaaataaaactatcggaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tctaactaggtatataattattgttaaagtttccatgggaaaaaataaaactatcggaaa 264
Query: 65 gtaatgaatacttaattttgttatgtttagagtatgtactcatgttacaatccaaaagct 124
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaataaataattaattttgttatgtttagagtatgtactcatgttacaatccaaaagct 324
Query: 125 aaaacataatttctcttaaatttatcccatcagacagtgattttatttgagaaagtttaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaacataatttctcttaaatttatcccatcagacagtgattttatttgagaaagtttaa 384
Query: 185 tttgtgaactttatctgaaccatctaattttatttcagaaagttggactgtatttctagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgtgaactttatctgaaccatctaattttatttcagaaagttggactgtatttctagc 444
Query: 245 atcttcaaacatttcattcatcactatattcatcattttcaatgaattgttctgtgtttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcttcaaacatttcattcatcactatattcatcattttcaatgaattgttctgtgtttt 504
Query: 305 caatatgttataattttgtctattatgatatttgttattagataataatattcagagtct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caatatgttataattttgtctattatgatatttgttattagataataatattcagagtct 564
Query: 365 tagtcagtactcaagtgctgtgaagagacagcatgaccacagcaagtcatgtaaaggaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagtcagtactcaagtgctgtgaagagacagcatgaccacagcaagtcatgtaaaggaaa 624
Query: 425 gcatttaattggcgcttctttatggtttcaga 456
| |||||||||| |||||||||||||||||||
Sbjct: 625 gtatttaattggggcttctttatggtttcaga 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
