Query= MSMg01no078_k12.b1 MSMg01no078_k12.b1 CHROMAT_FILE:
MSMg01no078_k12.b1 PHD_FILE: MSMg01no078_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:03 2005
(428 letters)
>mm_chr14_112695727_112696554
Length = 828
Score = 797 bits (412), Expect = 0.0
Identities = 424/428 (99%)
Strand = Plus / Plus
Query: 1 aattaggactacacaatcatttgttattgatgttaagttgatcagcaaacaaaatgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattaggactacacaatcatttgttattgatgttaagttgatcagcaaacaaaatgttta 260
Query: 61 tccttagagtgtatgccctttgttgaatttgccatacttgttgctacataagataattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccttagagtgtatgccctttgttgaatttgccatacttgttgctacataagataattaa 320
Query: 121 atggacacttaagtatcgaaggcagatttggttgatttgcattgcatggagataaaagtc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggacacttaagtatctaaggcagatttggttgatttgcattgcatggagataaaagtc 380
Query: 181 taggttgatgaatttaaaaacacacatgcacacacatagctcaaggagaagacagaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggttgatgaatttaaaaacacacatgcacacacatagctcaaggagaagacagaaaat 440
Query: 241 atatggactctagtttttatctgccaactaatctgcattttgaagtcagctgtcaaattt 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatggacacaagtttttatctgccaactaatctgcattttgaagtcagctgtcaaattt 500
Query: 301 gattaattgtaagtacaggggacagccagtacacagtggccttcattagatctagaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattaattgtaagtacaggggacagccagtacacagtggccttcattagatctagaattt 560
Query: 361 tctgtgcccttctccaataatcaggatggatctgcttacaactttgacttctcctgcagt 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgtgcccttcaccaataatcaggatggatctgcttacaactttgacttctcctgcagt 620
Query: 421 gcatatag 428
||||||||
Sbjct: 621 gcatatag 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_k12.g1 MSMg01no078_k12.g1 CHROMAT_FILE:
MSMg01no078_k12.g1 PHD_FILE: MSMg01no078_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:03 2005
(462 letters)
>mm_chr14_112796216_112797077
Length = 862
Score = 849 bits (439), Expect = 0.0
Identities = 457/463 (98%), Gaps = 1/463 (0%)
Strand = Plus / Minus
Query: 1 acagtcctgaaaattcttgagaggtgaaaggagacacacaacctttgtgatcttaaatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 acagtcctgaaaattcttgagaggtgaaaggagacacacaacctttgtgatcttaaatag 732
Query: 61 aaaccta-tctatgcagataggagtctagcaaaactgtcctctgtgaagctccacccaac 119
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 731 aaacctattctatgcagataggagtctagcacaactgtcctctgtgaagctccacccaac 672
Query: 120 actctcacttgtatatttgagatggaagaaaaaaattcaaaaggaagattaagctcaacc 179
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 671 actctcacttgtatatttgagatggaaggaaaaaattcaaaaggaagattaagctcaacc 612
Query: 180 tgtttcctatatgccacacacttgtattaaagtggcatagcaggttataatccatgttgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgtttcctatatgccacacacttgtattaaagtggcatagcaggttataatccatgttgg 552
Query: 240 ctgccaggcctttgtactctccctatctttcggtgtaaatgactacaagctttttagggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctgccaggcctttgtactctccctatctttcggtgtaaatgactacaagctttttagggg 492
Query: 300 gaaaatatcttcaatgtcaacaaggtggaagaattttcactgtcagcaagccatatcaag 359
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 491 gaaaatatcttcaatgtcaacaaggtggaagaattttcactgacagcaagccatatcaag 432
Query: 360 aactgtgaatcctggcaactcactggaggaatctgtctggaattgaattattgaattcaa 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 431 aactgtgaatcctggcaactcactggtggaatctgtctggaattgaattattgaattcaa 372
Query: 420 ttaaaacggaaattaatcgtgttccttcttataaagaaagaaa 462
|||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 371 ttaaaacggaaattaatcgtgttctttcttataaagaaagaaa 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
