Query= MSMg01no079_p10.b1 MSMg01no079_p10.b1 CHROMAT_FILE:
MSMg01no079_p10.b1 PHD_FILE: MSMg01no079_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:43 2005
(549 letters)
>mm_chr14_48725068_48726017
Length = 950
Score = 756 bits (391), Expect = 0.0
Identities = 394/395 (99%), Gaps = 1/395 (0%)
Strand = Plus / Minus
Query: 1 caaagacagtcctgactgaactcc-agattaaaagccactatgagaaacaaaacaaattt 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 395 caaagacagtcctgactgaactccaagattaaaagccactatgagaaacaaaacaaattt 336
Query: 60 ctggcaagtgagggacatctgagcagacgttaaatatgttagctgcatctaggccagcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctggcaagtgagggacatctgagcagacgttaaatatgttagctgcatctaggccagcag 276
Query: 120 atatttaaaccagaagagaatcccaagccataccaaacctcacagaaaacgttgttttag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atatttaaaccagaagagaatcccaagccataccaaacctcacagaaaacgttgttttag 216
Query: 180 aaatattacttgccagagctgtggagatggctcagaggttaagtgtgcttcctgcccttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aaatattacttgccagagctgtggagatggctcagaggttaagtgtgcttcctgcccttt 156
Query: 240 cagaggatgccagtttccagcgtccatatccagtagctcacaactgcctgtaattccagc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cagaggatgccagtttccagcgtccatatccagtagctcacaactgcctgtaattccagc 96
Query: 300 tccaagcgggtccaacacccttttcccgattctgtggtgtggacacccacattcacacag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tccaagcgggtccaacacccttttcccgattctgtggtgtggacacccacattcacacag 36
Query: 360 cacataccacccaacatatgaacataattaaaaag 394
|||||||||||||||||||||||||||||||||||
Sbjct: 35 cacataccacccaacatatgaacataattaaaaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_p10.g1 MSMg01no079_p10.g1 CHROMAT_FILE:
MSMg01no079_p10.g1 PHD_FILE: MSMg01no079_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:44 2005
(569 letters)
>mm_chr14_48560882_48561850
Length = 969
Score = 1093 bits (565), Expect = 0.0
Identities = 568/569 (99%)
Strand = Plus / Plus
Query: 1 aacaggaaatagtaaagcccacagctcagcaggcataggacaatcagagacagtctctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaggaaatagtaaagcccacagctcagcaggcataggacaatcagagacagtctctaa 260
Query: 61 cctgaaccagacacagagcacttcagaggactccacactgttgcaagtggatagagaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgaaccagacacagagcacttcagaggactccacactgttgcaagtggatagagaaga 320
Query: 121 atttaagcctctcctctacctgaccacagctagcagacaaagctgtcagctggatcttgc 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttaagcctctcctctacctgaccacagctagcagacaaagctgtcagctggatcttgc 380
Query: 181 tatacttgtctgagagccgagagctttggacccatcctaggctttgctctagtatttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatacttgtctgagagccgagagctttggacccatcctaggctttgctctagtatttgat 440
Query: 241 gaacacatgcacacgtttagctctctaataaaagccttaatctaataaaagtgaaaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacacatgcacacgtttagctctctaataaaagccttaatctaataaaagtgaaaatca 500
Query: 301 gggtcttaaatgaccagggactccacatggcaaaccttatcctccgctcaggtatcctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtcttaaatgaccagggactccacatggcaaaccttatcctccgctcaggtatcctaa 560
Query: 361 tagcacgtcatcgttctaagggcataaaatggtgaaggaggttttggtggcagcattgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagcacgtcatcgttctaagggcataaaatggtgaaggaggttttggtggcagcattgtg 620
Query: 421 ggcatggttggatgctgggagggactgaagatggatcggcaagctagacgggccatttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcatggttggatgctgggagggactgaagatggatcggcaagctagacgggccatttac 680
Query: 481 agaccacactgtggttttgctgtggcacagcacagagactacacactacagagtcatccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaccacactgtggttttgctgtggcacagcacagagactacacactacagagtcatccc 740
Query: 541 aaacttggtgtcgagtccggaggatgtca 569
|||||||||||||||||||||||||||||
Sbjct: 741 aaacttggtgtcgagtccggaggatgtca 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
