Query= MSMg01no082_f16.b1 MSMg01no082_f16.b1 CHROMAT_FILE:
MSMg01no082_f16.b1 PHD_FILE: MSMg01no082_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:48 2005
(609 letters)
>mm_chr14_85267908_85268917
Length = 1010
Score = 1102 bits (570), Expect = 0.0
Identities = 597/606 (98%), Gaps = 1/606 (0%)
Strand = Plus / Plus
Query: 5 gaattcctaatgc-ctatttgcaaaaaatatgaaactcaactagatttcaaattctggaa 63
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaaggtactatttgcaaaaaatatgaaactcaactagatttcaaattctggaa 264
Query: 64 aatcatcttgaattcactgcactggcctgggaccagcaaaaataaactggaagcaaacag 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 aatcatcttgaattcactgcactggcctgggaccagcaagaataaactggaagcaaacag 324
Query: 124 tgtaagttaaacattctactcagtctctgtgctttttattcaattcttttgctttttaaa 183
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtaagttaaacattccactcagtctctgtgctttttattcaattcttttgctttttaaa 384
Query: 184 aattgcataggaacaaattaaataaattgctttgtactcttgcacacatgttgttttgag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aattgcataggaacaaattaaataaattgctttgtactcttgcacacatgttgttttgag 444
Query: 244 gtgggtataatcaagaaagacaatggaaaataatttggcattttaatgtagtgaatgctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgggtataatcaagaaagacaatggaaaataatttggcattttaatgtagtgaatgctt 504
Query: 304 agaactatcatcaacagtcctacccagagttcaggcacatatccaacctttgctctactc 363
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 505 agaactatcatcaacagtcctaccgagagttcaggcacatatccaacctttgctcttctc 564
Query: 364 tctttataatcatataaaatgatgtgagattgtctgctattgcatgctttatccttcgag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctttataatcatataaaatgatgtgagattgtctgctattgcatgctttatccttcgag 624
Query: 424 ttctggagaaagaaaatgagaaaagaacgcagaattaaataaaccgataagatagaccta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttctggagaaagaaaatgagaaaagaacgcagaattaaataaaccgataagatagaccta 684
Query: 484 tccaattcagatttaaaattgaatttcaacttgtttaaaggtatctgcactgtttacaca 543
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 685 tccaattcagatttaaaattgaatttcaacttgtttaaaggtatctgaactgtttacaca 744
Query: 544 aacaaatacaaaaatgcatctgctacttagcattgagtaggatttcccatatcgctgagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 745 aacaaatacaaaaatgcatctgctacttagcattgagtaggatttcccatatcgctgggg 804
Query: 604 tttggg 609
||||||
Sbjct: 805 tttggg 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1010
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1000
Effective search space: 599000
Effective search space used: 599000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_f16.g1 MSMg01no082_f16.g1 CHROMAT_FILE:
MSMg01no082_f16.g1 PHD_FILE: MSMg01no082_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:48 2005
(572 letters)
>mm_chr14_85435739_85436711
Length = 973
Score = 1077 bits (557), Expect = 0.0
Identities = 569/573 (99%), Gaps = 1/573 (0%)
Strand = Plus / Minus
Query: 1 ctgaagaagg-catcactgaggattttcttatgatggagctagagttttaaaggcctgtt 59
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 773 ctgaagaaggccatcactgaggattttcttatgatggagctagagttttaaaggtctgtt 714
Query: 60 ggggttggatagaatattcatctctgcctgagacacaactgaatattaagagtacagcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ggggttggatagaatattcatctctgcctgagacacaactgaatattaagagtacagcct 654
Query: 120 cgaataagtttgtgaattctgatatcgggagtcacgaggaaatctgtcaacactttcttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cgaataagtttgtgaattctgatatcgggagtcacgaggaaatctgtcaacactttcttg 594
Query: 180 ctggtaagtacaaaattagagtacataatttctaaatccccttttcagaattctttaact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ctggtaagtacaaaattagagtacataatttctaaatccccttttcagaattctttaact 534
Query: 240 aatatgtcatgaatttactcattgaatgaaatatgaagtaggggttagggacagagagag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aatatgtcatgaatttactcattgaatgaaatatgaagtaggggttagggacagagagag 474
Query: 300 tacaaataacccgaaaaagcctttacaagtttttgacaatgaaaaatatttccaaatgtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tacaaataacccgaaaaagcctttacaagtttttgacaatgaaaaatatttccaaatgtg 414
Query: 360 tagaaatccagagaaattctttgatatcaaactgatatgttgaaaaatataattcaaccc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 413 tagaaatccagagaaattctttgatatcaaactgatatgttgaaaaatataattcatccc 354
Query: 420 tttgcaactgggatataaacattctgtgacattatatacaggtgccactgttatatacta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tttgcaactgggatataaacattctgtgacattatatacaggtgccactgttatatacta 294
Query: 480 cagagccttatgcatgtgaatacgactgatctgtggacctcagattaagataaagaagaa 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 293 cagagccttatgcatgtgaatacgactgatctgtggacctcagattaagaaaaagaagaa 234
Query: 540 gaaagaaagaaagagatgggtggcagctctggg 572
|||||||||||||||||||||||||||||||||
Sbjct: 233 gaaagaaagaaagagatgggtggcagctctggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 973
Length adjustment: 10
Effective length of query: 562
Effective length of database: 963
Effective search space: 541206
Effective search space used: 541206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
