Query= MSMg01no086_m09.b1 MSMg01no086_m09.b1 CHROMAT_FILE:
MSMg01no086_m09.b1 PHD_FILE: MSMg01no086_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:38 2005
(346 letters)
>mm_chr14_109881897_109882642
Length = 746
Score = 584 bits (302), Expect = e-171
Identities = 335/346 (96%)
Strand = Plus / Plus
Query: 1 tatatgatttaaaaggtaaatcttataaattttagaataattggtgtactgaaaaccaga 60
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||
Sbjct: 201 tatatgatttaaaaggtaaatcttataaattttagaataattggggtacagaaaatcaga 260
Query: 61 ggaaaaatgatgctgatgttgaaatgaaaagtaaaagactactagcaactgcgaaatttt 120
|||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| |||
Sbjct: 261 ggaaaaatgatgctgacgttgaaatgaaaagaaaaagactactagcaactgagaaaattt 320
Query: 121 tagtaagacttagcttcacaaatataaattaaaagtgataatttatatcgtctctgaata 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 321 tagtaagacttagcttcacaaatataaattaaaagtgataatttatatcatctccgaata 380
Query: 181 tccaagccaaaatactgaaaagaatgaggactgagatgacagaggtaccaaaccaacaac 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tccaagccaaaatactgaaaagaatgagaactgagatgacagaggtaccaaaccaacaac 440
Query: 241 aaattcaagtcaggtgtaacacatgcaaacatttttctatttcacagcacatattaaaat 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattcaagtcaggtggaacacatgcaaacatttttctatttcacagcacatattaaaat 500
Query: 301 gagttttaattaaactgatacataaaagaaaatgtcaaccataagc 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagttttaattaaactgatacataaaagaaaatgtcaaccataagc 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_m09.g1 MSMg01no086_m09.g1 CHROMAT_FILE:
MSMg01no086_m09.g1 PHD_FILE: MSMg01no086_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:38 2005
(644 letters)
>mm_chr14_110009701_110010743
Length = 1043
Score = 1222 bits (632), Expect = 0.0
Identities = 641/644 (99%), Gaps = 2/644 (0%)
Strand = Plus / Minus
Query: 1 attcacaaagcaatgtttaattatttcacattagtgattagaattatttgaagggtagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 attcacaaagcaatgtttaattatttcacattagtgattagaattatttgaagggtagta 916
Query: 61 tgtttttttaaaatagattattagtctgtgaatactaaaatattttatgaaatttaatta 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tg-ttttttaaaatagattattagtctgtgaatactaaaatattttatgaaatttaatta 857
Query: 121 tatatatttaaatgcctatttaggaaggaaggcgtaaaaatgaaacaaagcatttcatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 tatatatttaaatgcctatttaggaaggaaggcgtaaaaatgaaacaaagcatttcatgc 797
Query: 181 ctggagtccttatggtatgcaaaagacaaaatgcaatccatgacctctgtaacatcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ctggagtccttatggtatgcaaaagacaaaatgcaatccatgacctctgtaacatcaagt 737
Query: 241 caaaaagctaaagccattttgtcatttcttatttcagtttctttatctttaattgatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 caaaaagctaaagccattttgtcatttcttatttcagtttctttatctttaattgatctg 677
Query: 301 cacaatgctgagacagcagaatattgtgaaacttctattagtcacgaaaacatttggcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cacaatgctgagacagcagaatattgtgaaacttctattagtcacgaaaacatttggcag 617
Query: 361 tgaatacaaatcctgtggaatttccattttgctaatgtgccgtggctctggaaatactcc 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 616 tgaatacaaatcctgtggaatttccattttgctaatgtgccttggctctggaaatactcc 557
Query: 421 taacagcgccaatttctattctgtatcttatgtctttggtttcacctcctaacatttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 taacagcgccaatttctattctgtatcttatgtctttggtttcacctcctaacatttgat 497
Query: 481 caaaataattcctttaaataaagaggcattgacattagctttgaacacctccattttttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 496 caaaataattcctttaaataaagaggcattgacattagctttgaacacctcca-tttttt 438
Query: 541 aacagtgtgtttggtatttatttaatttgaaactaaatatgaccattttgagcttacaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aacagtgtgtttggtatttatttaatttgaaactaaatatgaccattttgagcttacaca 378
Query: 601 gcttacagcaatgtgaatacaactacatttaacatttattcatt 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gcttacagcaatgtgaatacaactacatttaacatttattcatt 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1043
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1033
Effective search space: 654922
Effective search space used: 654922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
