Query= MSMg01no088_k12.b1 MSMg01no088_k12.b1 CHROMAT_FILE:
MSMg01no088_k12.b1 PHD_FILE: MSMg01no088_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:12 2005
(375 letters)
>mm_chr14_62877098_62877876
Length = 779
Score = 658 bits (340), Expect = 0.0
Identities = 358/366 (97%), Gaps = 4/366 (1%)
Strand = Plus / Minus
Query: 5 gaattctcccttgccctgagtggcctttcctgggcagactgaagatggagtgcaggctgg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattctcccttggcctgagtggcctttcctgggcagactgaagatggagtgcaggctgg 511
Query: 65 ccaactgatgtctagatcgaactcgcaggaaacctcaatcccttgggcagctgaactctc 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccaactgatgtctagatcaaactcgcaggaaacctcaatcccttgggcagctgaactctc 451
Query: 125 actatctgagaccagctaggattattttcttacttcatttaatcagtcagttga----tt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 450 actatctgagaccagctaggattattttcttacttcatttaatcagtcagttgatagttt 391
Query: 181 gacagatgaggtcattgtgtccagtgtgaagtagagtgaaaattatgcagtagtttagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gacagatgaggtcattgtgtccagtgtgaagtagagtgaaaattatgcagtagtttagac 331
Query: 241 cacagcttggtttatcacccccagtgcacgcatcactcctaacgagatcattattgggct 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 330 cacagcttggtttatcacccccagtgcacgcagcactcctaacgagatcattattgggct 271
Query: 301 ctgatggaaagaaatgttcagctcccaggtgcccatgctttctggaatagattgagtgaa 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctgatggaaagaaatgttcagttcccaggtgcccatgctttctggaatagattgagtgaa 211
Query: 361 gttcgc 366
||||||
Sbjct: 210 gttcgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 779
Length adjustment: 9
Effective length of query: 366
Effective length of database: 770
Effective search space: 281820
Effective search space used: 281820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_k12.g1 MSMg01no088_k12.g1 CHROMAT_FILE:
MSMg01no088_k12.g1 PHD_FILE: MSMg01no088_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:13 2005
(209 letters)
>mm_chr14_62707389_62707999
Length = 611
Score = 366 bits (189), Expect = e-106
Identities = 205/211 (97%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 1 cacctggt--gagtgaggaggagggagattttgctgtgaaggcagagaaagggaaaggag 58
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacctggtgagagtgaggaggagcgagattttgctgtgaaggcagagaaagggaaaggag 260
Query: 59 ggccagcatcactagaataggtagcagacggtaggtcttgtaggcagaagaatgtattgc 118
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 261 ggccagcatcactagaataggtagcagacagtaggtcttataggcagaagaatgtattgc 320
Query: 119 tgaagagctgtgacgctgttgtgtaaagggcaatcaagagctgttgtaggatcgttggaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagagctgtgacgctgttgtgtaaagggcaatcaagagctgttgtaggatcgttggaa 380
Query: 179 tggggagagatggctgtcattgctgactaga 209
|||||||||||||||||||||||| ||||||
Sbjct: 381 tggggagagatggctgtcattgctaactaga 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 611
Length adjustment: 9
Effective length of query: 200
Effective length of database: 602
Effective search space: 120400
Effective search space used: 120400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
