Query= MSMg01no090_a09.b1 MSMg01no090_a09.b1 CHROMAT_FILE:
MSMg01no090_a09.b1 PHD_FILE: MSMg01no090_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:02 2005
(337 letters)
>mm_chr14_58784969_58785706
Length = 738
Score = 623 bits (322), Expect = 0.0
Identities = 334/338 (98%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 1 agtcttcttgtgctgtaggattatttctagcaatagacccatacttgtgcatgctctaag 60
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agtcgtcttgtgctgtaggattatttctagcaatagacccatacttgtgcatgctctaaa 479
Query: 61 ctcccgggttttattgcagaaagaa-ataagcaagctgatacattaatctgccctatttt 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 478 ctcccgggttttattgcagaaagaatataagcaagctgatacattaatctgccctatttt 419
Query: 120 ttttttacttccccagaagaaaattgggaaggggtgtggtatgcatctgctattgcagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttttttacttccccagaagaaaattgggaaggggtgtggtatgcatctgctattgcagat 359
Query: 180 ggatccactgaaacattttggattcctctgctactcacccagccctgggccctcggggac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggatccactgaaacattttggattcctctgctactcacccagccctgggccctcggggac 299
Query: 240 actggtggaagatgggaagtggaaagaaagatagcaaaccttcagataaaaagagtgcat 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 actggtggaggatgggaagtggaaagaaagatagcaaaccttcagataaaaagagtgcat 239
Query: 300 caccatatcatcagaattcaagtctgccttcctggggc 337
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 caccatatcatcagaattcaagtctgccttcctggggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_a09.g1 MSMg01no090_a09.g1 CHROMAT_FILE:
MSMg01no090_a09.g1 PHD_FILE: MSMg01no090_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:02 2005
(281 letters)
>mm_chr14_58654227_58654908
Length = 682
Score = 509 bits (263), Expect = e-148
Identities = 275/279 (98%), Gaps = 1/279 (0%)
Strand = Plus / Plus
Query: 1 catttttttcctcaccataactctctcccaccataactttttcttgctaa-taaatatgt 59
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 catttttttcctcaccataactctctcccaccataactttttcttgctaaataaatatgt 260
Query: 60 cacgggctgaggggacaggtgggctaattttccaattctgtatggttttctgcagagact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacgggctgaggggacaggtgggctaattttccaattctgtatggttttctgcagagact 320
Query: 120 agaggatctgggaggatggcttagtgaggagacaggaatgggtgtcctgggggtggggca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaggatctgggaggatggcttagtgaggagacaggaatgggtgtcctgggggtggggca 380
Query: 180 agtgcacaagattgtcagcgcgcacaaaaaaatccaggtggggctatatgagtctgagat 239
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 agtgcacaagattgtcagcgtgcacaagaaaatccaggtggggctatatgagtctgagat 440
Query: 240 ctcagtgtggagatgggaagatttctacagttcactggc 278
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 ctcagtgtggagatgggaagatctctacagttcactggc 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 682
Length adjustment: 9
Effective length of query: 272
Effective length of database: 673
Effective search space: 183056
Effective search space used: 183056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
