Query= MSMg01no090_m23.b1 MSMg01no090_m23.b1 CHROMAT_FILE:
MSMg01no090_m23.b1 PHD_FILE: MSMg01no090_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:05 2005
(317 letters)
>mm_chr14_119914280_119914996
Length = 717
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttaaacagcattatcttcatatacaagttcatacaactatttagatagtttta 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaattcttaaacagcattatctttatatacaagttcatacaactatttagatagtttta 458
Query: 64 ttaatattgaatatacaaaccaactcatgaaagctgatcccctcctaactaggaatatga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttaatattgaatatacaaaccaactcatgaaagctgatcccctcctaactaggaatatga 398
Query: 124 tataggttaccatttgtttagattgccttttgcaattacttgcaaaacaaattaaatctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tataggttaccatttgtttagattgccttttgcaattacttgcaaaacaaattaaatctg 338
Query: 184 tatgtgtttttctgtctgatatcacacattgcctgataatacagtacatatacttactac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tatgtgtttttctgtctgatatcacacattgcctgataatacagtacatatacttactac 278
Query: 244 catatccttataatggaatacctgtcacttgtatcctcttgactctgcacatgatacttt 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 catatccttataacggaatacctgtcacttgtatcctcttgactctgcacatgatacttt 218
Query: 304 atgacattcttagt 317
||||||||||||||
Sbjct: 217 atgacattcttagt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_m23.g1 MSMg01no090_m23.g1 CHROMAT_FILE:
MSMg01no090_m23.g1 PHD_FILE: MSMg01no090_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:05 2005
(282 letters)
>mm_chr14_119857888_119858567
Length = 680
Score = 524 bits (271), Expect = e-153
Identities = 278/281 (98%), Gaps = 2/281 (0%)
Strand = Plus / Plus
Query: 1 tataggtttaaaatataatgacacagtggtatgttaaaatttattcttttgaattctgac 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tataggtttaaaatataatgaca--gtggtatgttaaaatttattcttttgaattctgac 258
Query: 61 tctataatgtgaaatgagggttttgaaattttttttattattcctctttaacctcaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tctataatgtgaaatgagggttttgaaattttttttattattcctctttaacctcaacat 318
Query: 121 cagaggactttaaaaaaaatccttggtggaattagagaaaaacaaaacaatgtgtggttc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagaggacttaaaaaaaaatccttggtggaattagagaaaaacaaaacaatgtgtggttc 378
Query: 181 aatttattccagaaagtataattaaatatattctaaaataaatattgtatgttgatagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatttattccagaaagtataattaaatatattctaaaataaatattgtatgttgatagct 438
Query: 241 taatcatgtttaagatcaatagatccatttagaaatgatta 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taatcatgtttaagatcaatagatccatttagaaatgatta 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 680
Length adjustment: 9
Effective length of query: 273
Effective length of database: 671
Effective search space: 183183
Effective search space used: 183183
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
