Query= MSMg01no094_m06.b1 MSMg01no094_m06.b1 CHROMAT_FILE:
MSMg01no094_m06.b1 PHD_FILE: MSMg01no094_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:33 2005
(617 letters)
>mm_chr14_91538633_91539650
Length = 1018
Score = 1178 bits (609), Expect = 0.0
Identities = 612/613 (99%), Gaps = 1/613 (0%)
Strand = Plus / Minus
Query: 6 gaattcattccatcagcagacaccaaaccctgatgttagctattgctgatgccatgaatc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 gaattcattccatcagcagacaccaaaccctgatgttagctattgctgatgccatgaatc 870
Query: 66 tcttcctgacaggagcctggtatagatgttctctgagaggttctaccagcaatattcaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tcttcctgacaggagcctggtatagatgttctctgagaggttctaccagcaatattcaat 810
Query: 126 ttcatgtgaatattcaatattcacattaaaatatcccctcaactatgtatacataatc-a 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 809 ttcatgtgaatattcaatattcacattaaaatatcccctcaactatgtatacataatcaa 750
Query: 185 aaaaaaaacacagaaagcatgagacaaacatgtgaaaatagaaaaaataagaacttgaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aaaaaaaacacagaaagcatgagacaaacatgtgaaaatagaaaaaataagaacttgaaa 690
Query: 245 atatttgacattattcaaagaacaacctcataaatacaataattgaatctagaaaataat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 atatttgacattattcaaagaacaacctcataaatacaataattgaatctagaaaataat 630
Query: 305 tgagtctagaaaatcaaaagattccttttataaatgatcagctccaagaagatataaaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgagtctagaaaatcaaaagattccttttataaatgatcagctccaagaagatataaaca 570
Query: 365 acatctgtatgaattacaaaatagaatctcttatatgaaaactataaatccaaaagataa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 acatctgtatgaattacaaaatagaatctcttatatgaaaactataaatccaaaagataa 510
Query: 425 tagcataacaaaacagatgaagcacaggcttaaagaagccttattaaatgaaataatctc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tagcataacaaaacagatgaagcacaggcttaaagaagccttattaaatgaaataatctc 450
Query: 485 ataagttaaactcttttccttatgtgatagttgaatctttaagtgctaagaaaagaaaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ataagttaaactcttttccttatgtgatagttgaatctttaagtgctaagaaaagaaaac 390
Query: 545 aaagaatatagaataggcaacatagacttactgagtcatttataaaatcaaactctccaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaagaatatagaataggcaacatagacttactgagtcatttataaaatcaaactctccaa 330
Query: 605 aaaaaaaaaaatc 617
|||||||||||||
Sbjct: 329 aaaaaaaaaaatc 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1018
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1008
Effective search space: 611856
Effective search space used: 611856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no094_m06.g1 MSMg01no094_m06.g1 CHROMAT_FILE:
MSMg01no094_m06.g1 PHD_FILE: MSMg01no094_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:33 2005
(614 letters)
>mm_chr14_91464647_91465660
Length = 1014
Score = 1187 bits (614), Expect = 0.0
Identities = 614/614 (100%)
Strand = Plus / Plus
Query: 1 aagttaaaattatcaattattctcaatcagaaagtgaagagaataactgaattttagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttaaaattatcaattattctcaatcagaaagtgaagagaataactgaattttagttc 260
Query: 61 acctctatgattgttctgatttgtttgtttgtttttattatttctttaatgttctacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctctatgattgttctgatttgtttgtttgtttttattatttctttaatgttctacaca 320
Query: 121 ttttatcagaattttaaaacataaacatttttgtaaaaaataagagaaaatctttcatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttatcagaattttaaaacataaacatttttgtaaaaaataagagaaaatctttcatct 380
Query: 181 attttccatcttagaaactgcatgatgagaagaaaacaattaaaagaaaaatttcatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttccatcttagaaactgcatgatgagaagaaaacaattaaaagaaaaatttcatatc 440
Query: 241 catagtaacatcatcttgtaaagaaaatagatggcaaatttagtttcttatttcaccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catagtaacatcatcttgtaaagaaaatagatggcaaatttagtttcttatttcaccacc 500
Query: 301 aatgctagtttgaagtttaaaaagtagcaacttacctagaaaagaagaacaaaaactcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgctagtttgaagtttaaaaagtagcaacttacctagaaaagaagaacaaaaactcac 560
Query: 361 cagtgaaacacagaaaaaggaaaatgctaaaatgccctcatttattactatgagggtaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgaaacacagaaaaaggaaaatgctaaaatgccctcatttattactatgagggtaag 620
Query: 421 atgtctcctactgttattaaatgtttaatgtagctgttggcaggtgtgtataatgagcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtctcctactgttattaaatgtttaatgtagctgttggcaggtgtgtataatgagcta 680
Query: 481 tgtttcatgtctagaaggttgctaatggaactatttcttattcacctattgcacaatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtttcatgtctagaaggttgctaatggaactatttcttattcacctattgcacaatgtg 740
Query: 541 gaaatcatgtctgagcttcaaaaaattcattatcagcctgttccatttatgtaaagactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaatcatgtctgagcttcaaaaaattcattatcagcctgttccatttatgtaaagactg 800
Query: 601 gccctggcatacag 614
||||||||||||||
Sbjct: 801 gccctggcatacag 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
