Query= MSMg01no095_m21.b1 MSMg01no095_m21.b1 CHROMAT_FILE:
MSMg01no095_m21.b1 PHD_FILE: MSMg01no095_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:56 2005
(655 letters)
>mm_chr14_80828898_80829953
Length = 1056
Score = 1249 bits (646), Expect = 0.0
Identities = 649/650 (99%), Gaps = 1/650 (0%)
Strand = Plus / Plus
Query: 7 gaattcagtttaaaacaacaatctattcaagagactctctcttca-tacgatcccttgga 65
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 207 gaattcagtttaaaacaacaatctattcaagagactctctcttcaatacgatcccttgga 266
Query: 66 aatcctctcagcaaagctgtgccttttaatattgttttccttacactaatttattgaggg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatcctctcagcaaagctgtgccttttaatattgttttccttacactaatttattgaggg 326
Query: 126 ccaaagtaatctacctagtcaaaaggatacatggccctggagagtgacagcaagggagag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccaaagtaatctacctagtcaaaaggatacatggccctggagagtgacagcaagggagag 386
Query: 186 agtacaagaagggagcgagggaggcaaggaggcagagaatgactttttaatgaggttatc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtacaagaagggagcgagggaggcaaggaggcagagaatgactttttaatgaggttatc 446
Query: 246 atcttgaagtctgcttgaagatgaaagcatttcagagatgtgattttctctttgtcacag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcttgaagtctgcttgaagatgaaagcatttcagagatgtgattttctctttgtcacag 506
Query: 306 tctttgtctttctcaaatacaaagcacctgagtgaagaggtcacctgctatttttgatga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctttgtctttctcaaatacaaagcacctgagtgaagaggtcacctgctatttttgatga 566
Query: 366 ttccacttcataccctgtaacactaagacttaaagacagatagattggaggcctttcact 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttccacttcataccctgtaacactaagacttaaagacagatagattggaggcctttcact 626
Query: 426 tatttccttctcagatgagtggtcagaactgcaagccaacattgactctatgcttctttt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tatttccttctcagatgagtggtcagaactgcaagccaacattgactctatgcttctttt 686
Query: 486 tcaaccgctgccctgtaattggagaagtcattttttattggggctgatttgccctcactc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcaaccgctgccctgtaattggagaagtcattttttattggggctgatttgccctcactc 746
Query: 546 ttcccaagggctacttgaagggtttgaagatacctttggttgtcacagcagtatggaggc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttcccaagggctacttgaagggtttgaagatacctttggttgtcacagcagtatggaggc 806
Query: 606 tgcatctgcagcatcttaggaagaggaagaagatgctgctaactgtctta 655
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tgcatctgcagcatcttaggaagaggaagaagatgctgctaactgtctta 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_m21.g1 MSMg01no095_m21.g1 CHROMAT_FILE:
MSMg01no095_m21.g1 PHD_FILE: MSMg01no095_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:56 2005
(286 letters)
>mm_chr14_81003948_81004633
Length = 686
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Minus
Query: 1 aatgttatttgtttgaaaataaaaagttcattattgtctagtcatgaaactttcaatgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 486 aatgttatttgtttgaaaataaaaagttcattattgtctagtcatgaaacttgcaatgtt 427
Query: 61 tcaattgcaagatggatttgtaatagtctacacacagtataagaatgtagttcaaaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcaattgcaagatggatttgtaatagtctacacacagtataagaatgtagttcaaaacaa 367
Query: 121 aataaaagcacattgaaacctaaccgctgtagttattatttacatgataatctaatgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aataaaagcacattgaaacctaaccgctgtagttattatttacatgataatctaatgagc 307
Query: 181 ttggctgacaccgtgggtctcctttaatacctgaaattggaaaaattttatatttctaag 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 306 ttggctgacaccgtgggtctcctttaatacctgaaattggaaaaaatttatatttctaag 247
Query: 241 gtgatgtttaaaactgcatttcttataactcaaaaaaactatgttg 286
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 246 gtgatgtttaaaactgcttttcttataactcaaaaaaactatgttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
