Query= MSMg01no098_l22.b1 MSMg01no098_l22.b1 CHROMAT_FILE:
MSMg01no098_l22.b1 PHD_FILE: MSMg01no098_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:57 2005
(477 letters)
>mm_chr14_38791413_38792290
Length = 878
Score = 909 bits (470), Expect = 0.0
Identities = 476/478 (99%), Gaps = 1/478 (0%)
Strand = Plus / Plus
Query: 1 cttttgaacagctcccttcaaaaa-tattacttcatgagatttataatgtcagaaccata 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttgaacagctcccttcaaaaaatattacttcatgagatttataatgtcagaaccata 260
Query: 60 ttaaatatgcatgtttcaatttacccaacttttgttaaattttcatttaatgttgttatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaatatgcatgtttcaatttacccaacttttgttaaattttcatttaatgttgttatt 320
Query: 120 tttgtacatatcgtaatatattccttatttctgaaatattctttcattttagtttttata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtacatatcgtaatatattccttatttctgaaatattctttcattttagtttttata 380
Query: 180 ttttgttctgttctaatttcctctacttttgttttattgaaaatagttttttcatgcaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttgttctgttctaatttcctctacttttgttttattgaaaatagttttttcatgcaat 440
Query: 240 atattctaattagggttttccctccctcaattcctccaagatcctccccaaaatgcttca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattctaattagggttttccctccctcaattcctccaagatcctccccaaaatgcttca 500
Query: 300 atccaaattataccttttctatctcttagaaaacaaagaaacatctaaagaataatgata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atccaaattataccttttctatctcttagaaaacaaagaaacatctaaagaataatgata 560
Query: 360 aaataagacaaaaacaaacaaacaatcagtagaagagccaaaaataaaacacaagaaaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaataagacaaaaacaaacaaacaatcagtagaagagccaaaaataaaacacaagaaaca 620
Query: 420 catataaacacagagacacacatgttcctacacgcagccagcctgtacaaacacaaaa 477
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 catataaacacagagacacacatgttcctacacgcagccagtctgtacaaacacaaaa 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 878
Length adjustment: 10
Effective length of query: 467
Effective length of database: 868
Effective search space: 405356
Effective search space used: 405356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_l22.g1 MSMg01no098_l22.g1 CHROMAT_FILE:
MSMg01no098_l22.g1 PHD_FILE: MSMg01no098_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:57 2005
(367 letters)
>mm_chr14_38932339_38933105
Length = 767
Score = 673 bits (348), Expect = 0.0
Identities = 363/368 (98%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 1 ttataagcaccgta-caaaaaaaaaatctcagattactagccttataattttgtatcctg 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttataagcaccgtaccaaaaaaaaaatctcagattactagccttataattttgtatcctg 692
Query: 60 acatgaaacatctgcagtcattgtgtgacccaagcttttggtccagtgcagactggatca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acatgaaacatctgcagtcattgtgtgacccaagcttttggtccagtgcagactggatca 632
Query: 120 gtttcaaccattgcatgctttgttgctgttgttttgtttttgtttttgtttttgtttttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gtttcaaccattgcatgctttgttgctgttgttttgtttttgtttttgtttttgtttttg 572
Query: 180 ttttgtgtgtaagacctgcgtttgcatggctccaatttgcatggcagggattgctcagat 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 571 ttttgtgtgtaagacctgcgtttgcatggctccaatttgcgtggcagggattgctcagat 512
Query: 240 agaattgacatgcatagtgtctcattctaacttctcagaattatatactacactaatctt 299
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 511 agaagtgacatgcatagtgtctcattctaacttctcagaattatatactagactaatctt 452
Query: 300 tatgtggtatgaattacatgtcagtatattatgcacaaagaaaatcttcacaaatggaga 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 451 tatgtggtatgaattacatgtcagtatattatgcacaaagaaaatcttcacaaatggaaa 392
Query: 360 ttctttta 367
||||||||
Sbjct: 391 ttctttta 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
