Query= MSMg01no099_d17.b1 MSMg01no099_d17.b1 CHROMAT_FILE:
MSMg01no099_d17.b1 PHD_FILE: MSMg01no099_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:36 2005
(265 letters)
>mm_chr14_117976695_117977359
Length = 665
Score = 443 bits (229), Expect = e-129
Identities = 256/265 (96%)
Strand = Plus / Plus
Query: 1 acaatttcattattaattttactctcagactgttcttcctgaggaaccaggtttgagtga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 acaatttcattattaattttactctcagactgttcttccagaggaaccaggtttgagtga 260
Query: 61 ttccctgcgcccacacggtagcttgcaaccttctgggtctctagttccgaggtacctgat 120
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ttccaagcgcccacatggtagcttgcaaccttctgggtctctagttccgaggtacgtgat 320
Query: 121 gcatcctagcggcctcagtgttgcccagacatacatggagacacacgttaaatacatttt 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatcctagcggcctcagtggtgcccagacatacatggagacacacgttaaatacatttt 380
Query: 181 taacaaaagaaaattttattttgaaccaaaaatgacataagatcaatacaaccttcagcg 240
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 381 taacaaaagaaaattttattttgaaccaaaaatgaaataagatcaatacaaccttcagtg 440
Query: 241 aaaatccttagagaagtcttaaaaa 265
||||||| |||||||||||||||||
Sbjct: 441 aaaatccatagagaagtcttaaaaa 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no099_d17.g1 MSMg01no099_d17.g1 CHROMAT_FILE:
MSMg01no099_d17.g1 PHD_FILE: MSMg01no099_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:37 2005
(234 letters)
>mm_chr14_118107449_118108082
Length = 634
Score = 408 bits (211), Expect = e-118
Identities = 229/235 (97%), Gaps = 2/235 (0%)
Strand = Plus / Minus
Query: 1 aactacaaggctaccttggggcttctgcatctgctgctgcttcttcta-ccctgcccttt 59
|||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct: 434 aactacaaggctaccttggggcttctgcatctgctgctgcttcttctatcac-gcccttt 376
Query: 60 ctcttagccctttgcctcactctttgcctcctgcaggtatctgattaaaggaaggttttc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctcttagccctttgcctcactctttgcctcctgcaggtatctgattaaaggaaggttttc 316
Query: 120 ctgaccaagatgttcaaaaggcgaagcttcccccctcatcctttgctttcctggtttctt 179
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctgaccaagacgttcaaaaggggaagcttcccccctcatcctttgctttcctggtttctt 256
Query: 180 ttctttttcttttccttcttagttctgaatgccaaatgacctgagaatgactgac 234
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttctttttctttttcttcttagttctgaatgccaaatgacctgagaatgactgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
