Query= MSMg01no099_n03.b1 MSMg01no099_n03.b1 CHROMAT_FILE:
MSMg01no099_n03.b1 PHD_FILE: MSMg01no099_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:27 2005
(232 letters)
>mm_chr14_16525435_16526072
Length = 638
Score = 377 bits (195), Expect = e-109
Identities = 208/215 (96%), Gaps = 6/215 (2%)
Strand = Plus / Plus
Query: 24 acttttagctgcat-ttttttctacccttccccatattacactgttccaaacccccaatg 82
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 acttttagctgcacattttttctacccttccccatattacactgttccaaacccccaatg 283
Query: 83 ctcagaaagagagaaaaacagctataaggcattatatgactattaagctaagggaccggt 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctcagaaagagagaaaaacagctataaggcattatatgactattaagctaagggaccggt 343
Query: 143 aaaacactactaacaaataagaaaacaagaaaacaagtataaaaagaaagtaaaaaaaaa 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaaacactactaacaaataagaaaacaagaaaacaagtataaaaagaaagtaaaaaaaaa 403
Query: 203 a-----ttaaaagttatcagttgatgcaattttat 232
| |||||||||||||||||||||||||||||
Sbjct: 404 aaaaaattaaaagttatcagttgatgcaattttat 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 638
Length adjustment: 9
Effective length of query: 223
Effective length of database: 629
Effective search space: 140267
Effective search space used: 140267
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no099_n03.g1 MSMg01no099_n03.g1 CHROMAT_FILE:
MSMg01no099_n03.g1 PHD_FILE: MSMg01no099_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:28 2005
(445 letters)
>mm_chr14_16674836_16675680
Length = 845
Score = 729 bits (377), Expect = 0.0
Identities = 433/457 (94%), Gaps = 12/457 (2%)
Strand = Plus / Minus
Query: 1 caaagagggtagacatcaaccccctacatatgtgcatgctcacaaacaggcaaatacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 caaagagggtagacatcaaccccctacatatgtgcatgctcacaaacaggcaaatacaca 771
Query: 61 tacacactcacacacacacactcacactcacacacactcacacacactcaca--ca--ca 116
||||||| ||||||||||||| ||||| ||||||||| | |||||||||||| || ||
Sbjct: 770 tacacacacacacacacacacacacacacacacacacactcacacactcacactcactca 711
Query: 117 cactcacacacacacacacacacaca--cacacacacactcactcacacacacacagag- 173
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 710 cactcacacacacacacacacacacactcacacacacactcactcacacacacacagagg 651
Query: 174 -----gagagagagagagagagagtgacctccaaaagtgatactactacatattgtaata 228
||||||||||||||||||||||| |||||||||||||||| || |||||||||||
Sbjct: 650 agagagagagagagagagagagagtgacttccaaaagtgatactattatatattgtaata 591
Query: 229 cttgatttaaaaaatctgaggtcactaatgtactaatatcaaaatgtgtgcccttctcct 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cttgatttaaaaaatctgaggtcactaatgtactaatatcaaaatgtgtgcccttctcct 531
Query: 289 ttaaaatcacatttttattatctaaaaaatatacaatatatgctaatcatattctctctc 348
||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 530 ttaaaattacatttttattatttaaaaaatatacaatatatgttaatcatattctctttc 471
Query: 349 cttcctcaagtcttcccagatgtcttacccaacttcatgctctctctctgtctctgtctc 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cttcctcaagtcttcccagatgtcttacccaacttcatgctctctctctgtctctgtctc 411
Query: 409 acaaagagaaaatccagagaacacagaacaaagaact 445
|||||||||||||||||||||||||||||||||||||
Sbjct: 410 acaaagagaaaatccagagaacacagaacaaagaact 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 119
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
