This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-100D16
Chromosome
14 (Build37)
Map Location
89,664,065 - 89,664,398
singlet/doublet
singlet
Overlap gene
none
Upstream gene
LOC668624
,
LOC668625
,
Pcdh20
Downstream gene
EG328451
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC668624
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668624
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins
pseudo
: _no_value
name
LOC668625
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668625
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins
pseudo
: _no_value
name
Pcdh20
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:219257
MGI:2443376
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
EG328451
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:328451
MGI:3644528
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
pseudo
: _no_value
name
Pcdh20
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142351715
GeneID:219257
MGI:2443376
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: protocadherin 20
transcript_id
: NM_178685.4
name
Pcdh20
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:31982309
CCDS:CCDS27306.1
GeneID:219257
MGI:2443376
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA]
GO_function
: GO:0005515 - protein binding [Evidence IEA]
GO_process
: GO:0007155 - cell adhesion [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
product
: protocadherin 20
protein_id
: NP_848800.2
name
LOC668624
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668624
definition
number
: 3
pseudo
: _no_value
name
LOC668624
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668624
definition
number
: 2
pseudo
: _no_value
name
LOC668624
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668624
definition
number
: 1
pseudo
: _no_value
name
LOC668625
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668625
definition
number
: 1
pseudo
: _no_value
name
LOC668625
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668625
definition
number
: 2
pseudo
: _no_value
name
EG328451
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:142382744
GeneID:328451
MGI:3644528
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: predicted gene, EG328451
pseudo
: _no_value
transcript_id
: NR_002862.2
clone name
MSMg01-542C20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-175F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-184P13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-069M15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-329C19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-484D14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-401E17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-177A12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-528J03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-130L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-104N11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-056K16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-266L14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-118O16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-481E22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-169J09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-343B12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-533C11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-167D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-272F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-527P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-522D12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-118M20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-159A23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-356L07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261C24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-352P03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096M07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-326B24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-439H24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-192O11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-180D05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482A04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-190H13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-375L15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-263I06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-487M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173M09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173M11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-392G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-275B15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-465J13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-184G23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-105A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-273L23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-280H21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-539P08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-217D17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173N20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-168H20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-050L02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483N19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-387D10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-311I17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-508A24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-126D05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-425C05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-482G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-184C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-499D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-100D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-545A16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-161B24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-335F21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-441D23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-408A02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-367A10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-468N07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-517L14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-265A04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-052C02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072M06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-087C04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-101D23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-098B16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-359E02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-109K05
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-461F07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-533D17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-498J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-066N11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-075E17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316A13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530M15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-045H21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-519C23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-083O09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-087M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-106K16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-165E09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-064B03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-139D17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-205M06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-171J04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-400I16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-106N12
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-395C21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-401K12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-138C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-088B22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-323P23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-440L02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-476H18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-191O11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416O11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-343D15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-469K15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-179F18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-492D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495D05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-368K12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-370M01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530I22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-404A24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-336D23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-313P16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-488L05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-260G22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-384N07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-111C14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-343C12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-294E14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-006P13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-125G16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-148A19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-204C14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-314F15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-080G04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-233K08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-328N22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-327L15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-177E15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-010O23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-285N15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-015N03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-147O02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-224E14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-259P10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-341K07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-121K16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-301G11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-259O10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076A13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-071O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-073G14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-345A13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-276A06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-004O17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-327O12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-300A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-338I08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-183H01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-126K20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076D06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-151G09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-166H21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-318H19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-349A22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-249A18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-060O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-025B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-130F20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281M08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-234D07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-034E24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-219J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-257G23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150D13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-253K04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163O05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-041D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-331K06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-117E08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-102H23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-312A06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-088I10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-131H17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-169G10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-254O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-059M20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-249O01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-306H04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-014P14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-170K12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-015B01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-326F06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-148B01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003B04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-232L16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132B23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-266E12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-079E17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-341O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-083J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-055B07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-202J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-120H24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-196C07
singlet/doublet
doublet
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unique
clone name
B6Ng01-345F20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236I14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-304B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136G16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-238M16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-268D23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286F10
singlet/doublet
singlet
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unique
clone name
B6Ng01-255B13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-345F14
singlet/doublet
singlet
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unique
clone name
B6Ng01-285D11
singlet/doublet
doublet
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unique
clone name
B6Ng01-328N15
singlet/doublet
singlet
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unique
clone name
B6Ng01-087D08
singlet/doublet
doublet
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unique
clone name
B6Ng01-277F23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-338C17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-248F19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-050B15
singlet/doublet
doublet
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unique
clone name
B6Ng01-325L16
singlet/doublet
singlet
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unique
clone name
B6Ng01-264I05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-098M16
singlet/doublet
singlet
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unique
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B6Ng01-318C10
singlet/doublet
doublet
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clone name
B6Ng01-224K16
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B6Ng01-238N11
singlet/doublet
singlet
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clone name
B6Ng01-168I19
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singlet
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clone name
B6Ng01-140B06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-270L04
singlet/doublet
doublet
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clone name
B6Ng01-136P19
singlet/doublet
doublet
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clone name
B6Ng01-205K16
singlet/doublet
doublet
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clone name
B6Ng01-203D18
singlet/doublet
doublet
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unique
clone name
B6Ng01-272O18
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doublet
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B6Ng01-105J21
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doublet
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B6Ng01-202F04
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B6Ng01-072J03
singlet/doublet
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clone name
B6Ng01-256M08
singlet/doublet
doublet
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B6Ng01-206D22
singlet/doublet
singlet
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B6Ng01-043E03
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singlet
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B6Ng01-230A05
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B6Ng01-330O07
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B6Ng01-168M11
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doublet
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clone name
B6Ng01-233N23
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doublet
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clone name
B6Ng01-265F15
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B6Ng01-228L10
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clone name
B6Ng01-073L21
singlet/doublet
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