Query= MSMg01no101_j02.b1 MSMg01no101_j02.b1 CHROMAT_FILE:
MSMg01no101_j02.b1 PHD_FILE: MSMg01no101_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:49 2005
(629 letters)
>mm_chr14_98440872_98441900
Length = 1029
Score = 1208 bits (625), Expect = 0.0
Identities = 628/629 (99%)
Strand = Plus / Plus
Query: 1 agcttggtagggcagagacatcatctctaaaacaatgaattttgaacattgacaaataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttggtagggcagagacatcatctctaaaacaatgaattttgaacattgacaaataac 260
Query: 61 cagcaatagggtctaatagaaatggcctttacacatgggccagtgaatggcaatgtccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcaatagggtctaatagaaatggcctttacacatgggccagtgaatggcaatgtccta 320
Query: 121 acttaaaaatggaacagagtcttcatcaggaaactcagtgtagcagtacttagtacacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttaaaaatggaacagagtcttcatcaggaaactcagtgtagcagtacttagtacacag 380
Query: 181 tcaggctaggaataaataatgccctccaggacaatgcctgagtcaaatgtttatatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaggctaggaataaataatgccctccaggacaatgcctgagtcaaatgtttatatgttt 440
Query: 241 atggttctataaacaatgtattgtatattcttttatttgatcttcagtcattttgtcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggttctataaacaatgtattgtatattcttttatttgatcttcagtcattttgtcatg 500
Query: 301 tatagcatccaccctcatgctcctaaagccatgtgcatccctgccaggcaggagattcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatagcatccaccctcatgctcctaaagccatgtgcatccctgccaggcaggagattcct 560
Query: 361 ctctgccccactgtcagccatgtctagttcaaggctcagccataatcatgtttaacaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctgccccactgtcagccatgtctagttcaaggctcagccataatcatgtttaacaaat 620
Query: 421 gtgtttgactaactaaattaaactgtaatataaatggaattcattcatttttaattccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 gtgtttgactaactaaattaaactgtaatataaatggaattcattcattttaaattccaa 680
Query: 481 agcactacacggtgtttaagttttcagattctttgaagactggggatttaatgaaatatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcactacacggtgtttaagttttcagattctttgaagactggggatttaatgaaatatt 740
Query: 541 gaatctttttgcttgctaactagctcatgatgtaaaaattataaaatgtagacctgggtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaatctttttgcttgctaactagctcatgatgtaaaaattataaaatgtagacctgggtc 800
Query: 601 ctttgtacaaataaatgtttccactgagt 629
|||||||||||||||||||||||||||||
Sbjct: 801 ctttgtacaaataaatgtttccactgagt 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no101_j02.g1 MSMg01no101_j02.g1 CHROMAT_FILE:
MSMg01no101_j02.g1 PHD_FILE: MSMg01no101_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:49 2005
(245 letters)
>mm_chr14_98612627_98613272
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 1 attgcttttcagctgagat-acactgtctcaaatggaacttgaaagaaagcttgagtttt 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 attgcttttcagctgagataacactgtctcaaatggaacttgaaagaaagcttgagtttt 387
Query: 60 tggtgctggaggaaagacctatgatatggatactcccactaatcaactcctacccatatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tggtgctggaggaaagacctatgatatggatactcccactaatcaactcctacccatatg 327
Query: 120 aacactggaggagttgactacttttgtccaagtctaacatgtgataaggctgctgcttga 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 326 aacactggaggagttgactacttttgtccaagtctaagatgtgataaggctgctgcttga 267
Query: 180 aattgattttagcctgaaaatgtaatattctttctactttgaaataaagagctcctccag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aattgattttagcctgaaaatgtaatattctttctactttgaaataaagagctcctccag 207
Query: 240 ccttga 245
||||||
Sbjct: 206 ccttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
