Query= MSMg01no102_l02.b1 MSMg01no102_l02.b1 CHROMAT_FILE:
MSMg01no102_l02.b1 PHD_FILE: MSMg01no102_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:21 2005
(261 letters)
>mm_chr14_115998313_115998973
Length = 661
Score = 489 bits (253), Expect = e-143
Identities = 259/261 (99%)
Strand = Plus / Plus
Query: 1 acattccctcctctccatcatcttatatgttgcttcaaggtatatttatattttattaca 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acattctctcctctccatcatcttatatgttgcttcaaggtatatttatattttattaca 260
Query: 61 tttttaaattttatggtaaaatatacaaaattcctcatctgttttataacagtatatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttaaattttatggtaaaatatacaaaattcctcatctgttttataacagtatatttc 320
Query: 121 tggtgtttaagagttaatatgtctcttttattgttttatgttcatgtttatatgactgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtgtttaagagttaatatgtctcttttattgttttatgttcatgtttatatgactgct 380
Query: 181 aagcaaactcctttgtacctgtcaactgtaatccgtgactgttcttaccaagtggaacct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 aagcaaactcctttgtacctgtcaactgtaatccgtggctgttcttaccaagtggaacct 440
Query: 241 ggaaattttctctttgaagta 261
|||||||||||||||||||||
Sbjct: 441 ggaaattttctctttgaagta 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_l02.g1 MSMg01no102_l02.g1 CHROMAT_FILE:
MSMg01no102_l02.g1 PHD_FILE: MSMg01no102_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:21 2005
(532 letters)
>mm_chr14_116118974_116119906
Length = 933
Score = 1015 bits (525), Expect = 0.0
Identities = 531/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 1 acactgtggaaaaag-atttctcctgaatatttgattccatgaacttatgtagacatatc 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 acactgtggaaaaagtatttctcctgaatatttgattccatgaacttatgtagacatatc 674
Query: 60 tctatattggatttcaataagtctgcaaaaatgaaatgtctacctttagtcagctttgat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tctatattggatttcaataagtctgcaaaaatgaaatgtctacctttagtcagctttgat 614
Query: 120 ttatatctatacaaatttaattccaacatgtagtgacataaaatctgtaaaataacttgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttatatctatacaaatttaattccaacatgtagtgacataaaatctgtaaaataacttgg 554
Query: 180 caccagaataaacatatagtaagagtttttattcttttttcctcaaaatgaaactatggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 caccagaataaacatatagtaagagtttttattcttttttcctcaaaatgaaactatggg 494
Query: 240 tcttttataaaatcattgtcatttgttcatagcagaatattgactcctattaattttagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcttttataaaatcattgtcatttgttcatagcagaatattgactcctattaattttagt 434
Query: 300 attgaaacattaaaaatatggattgtttaggaaataatcttcacttaagaatttcctaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 attgaaacattaaaaatatggattgtttaggaaataatcttcacttaagaatttcctaat 374
Query: 360 ttaatttgttctttaataatttcatgtatgtacataatgtaatataactactctcactcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttaatttgttctttaataatttcatgtatgtacataatgtaatataactactctcactcc 314
Query: 420 acattatttctctgttttaaactcctggataatctcttcttttcaaacattcatggctaa 479
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acattatttctctgttctaaactcctggataatctcttcttttcaaacattcatggctaa 254
Query: 480 ttcattttgtcctgaggcccactgagtgtatccatgtttatctgtgtaaccat 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttcattttgtcctgaggcccactgagtgtatccatgtttatctgtgtaaccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
