Query= MSMg01no107_a12.b1 MSMg01no107_a12.b1 CHROMAT_FILE:
MSMg01no107_a12.b1 PHD_FILE: MSMg01no107_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:18 2005
(327 letters)
>mm_chr14_53385297_53386023
Length = 727
Score = 625 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Plus
Query: 1 cttatattttgttttcttcaggatcacgcaaacacttatttcatttaagataattttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttatattttgttttcttcaggatcacgcaaacacttatttcatttaagataattttctt 260
Query: 61 tttctttctttctttattaatttttttcacaatcttttctttgacccccctccccgctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctttctttctttattaatttttttcacaatcttttctttgacccccctccccgctca 320
Query: 121 cccttccacagtttcttattgcctggcctctctaaattcctggggcctcaattttccact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccttccacagtttcttattgcctggcctctctaaattcctggggcctcaattttccact 380
Query: 181 gttaggcaccacgtctcccactgaggccagatcaggcagtcctttgctgtatgtacgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttaggcaccacgtctcccactgaggccagatcaggcagtcctttgctgtatgtacgtga 440
Query: 241 gggtggggtgggtctggtgtgcttggactggctcatgtttactgtctgttttgtggctct 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 gggtggggtgggtctggtgtgcttggactggctcatgtatactgtctgttttgtggctct 500
Query: 301 gtctgagaaatctcaggggtctggatt 327
|||||||||||||||||||||||||||
Sbjct: 501 gtctgagaaatctcaggggtctggatt 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_a12.g1 MSMg01no107_a12.g1 CHROMAT_FILE:
MSMg01no107_a12.g1 PHD_FILE: MSMg01no107_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:19 2005
(274 letters)
>mm_chr14_53805846_53806520
Length = 675
Score = 418 bits (216), Expect = e-121
Identities = 261/276 (94%), Gaps = 3/276 (1%)
Strand = Plus / Minus
Query: 1 ctataattgccgtgaggctctaactctatatgaggagcaacattctgctggtgcttgctg 60
||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 475 ctataattgccatgaggctccaactcaatatgaggagcaacattctgttggtgcttgctg 416
Query: 61 -gcgaagggaaagccatattcctccatgctataggcacagataaggtatttatctttcct 119
| | ||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||
Sbjct: 415 ag-ggagggaaagccacattcctccatggtataggcacagaaaagatatttatctttcct 357
Query: 120 ccaatgactccctcactcacatccaccctagtagaagaactcctaattaattgcagtgtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ccaatgactccctcactcacatccaccctagtagaagaactcctaattaattgcagtgtg 297
Query: 180 ccataagtgaaggacataaatat-aaaacataaataaaaactgttgaaagaagatgggac 238
||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||
Sbjct: 296 ccataagtgaaggacataaatataaaaacataaatataaaccgttgaaagaagatgggac 237
Query: 239 ttgtgtggacagggaggatagtcaggataatggagg 274
||||| ||||||||||||||||||||||||||||||
Sbjct: 236 ttgtggggacagggaggatagtcaggataatggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 675
Length adjustment: 9
Effective length of query: 265
Effective length of database: 666
Effective search space: 176490
Effective search space used: 176490
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
