Query= MSMg01no107_l05.b1 MSMg01no107_l05.b1 CHROMAT_FILE:
MSMg01no107_l05.b1 PHD_FILE: MSMg01no107_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:56 2005
(374 letters)
>mm_chr14_110830884_110831657
Length = 774
Score = 366 bits (189), Expect = e-105
Identities = 222/233 (95%), Gaps = 2/233 (0%)
Strand = Plus / Minus
Query: 143 tgtgtgtgtgtaaagcaacacagaaactaaagatgtggtgaatacatataagtaagcatg 202
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 469 tgtgtgtgtgtaaagcaacacagaaactaaagatgtggtgaatagatataagtaagcatg 410
Query: 203 agcaattatagtggttactttatttcaatttagaaaataaaagtgataagaattgtagcc 262
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agcaattatagtggtcactttatttcaatttagaaaataaaagtgataagaattgtagcc 350
Query: 263 atggcgtggtggcacccacctttaatcccatcactcaagaggcagaagcaagcagatttc 322
||||| |||||| |||| |||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 349 atggcatggtgggacccgcctttaatcccagcactcaagaggcagaggcaagcagatttc 290
Query: 323 tga-tttcgaggccagcctagtctacagagtgagttccaggacagccagggct 374
||| ||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 289 tgagttt-gaggccagcttggtctacagagtgagttccaggacagccagggct 238
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_l05.g1 MSMg01no107_l05.g1 CHROMAT_FILE:
MSMg01no107_l05.g1 PHD_FILE: MSMg01no107_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:56 2005
(642 letters)
>mm_chr14_110714220_110715256
Length = 1037
Score = 1149 bits (594), Expect = 0.0
Identities = 627/640 (97%), Gaps = 5/640 (0%)
Strand = Plus / Plus
Query: 1 taatgacactattaatactgaatgaagtttttgctcaaatcacttccctgtttcctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatgacactattaatactgaatgaagtttttgctcaaatcacttccctgtttcctaatt 260
Query: 61 actctgaccatttaaatcatttagttacaatagaactggaactaaaaagtaaagaaataa 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 actctgaccatttaaatcatttagttacaatagaactggagctaaaaagtaaagaaataa 320
Query: 121 aattaatgtcaagacagtaatcagcatgagaggatcgattgctgttaacattaataaaac 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaatgtcaagacagtaatcaggatgagaggatcgattgctgttaacattaataaaac 380
Query: 181 tgcaatgattaactcactgtttataaaaagaggaatatttactctctaaaattatatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcaatgattaactcactgtttataaaaagaggaatatttactctctaaaattatatttg 440
Query: 241 aaaataaagcattctgtaatttcataatgaattgcaatctaaaccttttcaagttttagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaataaagcattctgtaatttcataatgaattgcaatctaaaccttttcaagttttagt 500
Query: 301 agttccaaaggaattgtggggacaccatcactttttgtaattttcattcagatacataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttccaaaggaattgtggggacaccatcactttttgtaattttcattcagatacataaa 560
Query: 361 atacaggttgttattttaatttttttctctttagtactttgtagttaactacagggaaac 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacaggttgttattttaattttcttctctttagtactttgtagttaactacagggaaac 620
Query: 421 tatatgataaatcttcaacttaataaagtcagaaaacaaaatccaatgaaatttagaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatatgataaatcttcaacttaataaagtcagaaaacaaaatccaatgaaatttagaaaa 680
Query: 481 cacacacacacacacacatacttgatcatagaacaaaactctggaatgtaagtccatgac 540
|||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 681 cacacacacacaca----tacttgatcatagaactaaattctggaatgtaagtccatgaa 736
Query: 541 taaaaataataaagtatcacatttagtttatagaaaaataaagctatgtataaaattttt 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 737 taaaaataataaagtatcacatttagtttatagaaaaataaag-tatgtataaaaatttt 795
Query: 601 tgtgcagtgtactgacttcgtttttcctacataatattaa 640
|||||||||||||||||| |||||||||||||||||||||
Sbjct: 796 tgtgcagtgtactgactttgtttttcctacataatattaa 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1037
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1027
Effective search space: 649064
Effective search space used: 649064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
