Query= MSMg01no108_a23.b1 MSMg01no108_a23.b1 CHROMAT_FILE:
MSMg01no108_a23.b1 PHD_FILE: MSMg01no108_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:46 2005
(646 letters)
>mm_chr14_83534894_83535939
Length = 1046
Score = 1046 bits (541), Expect = 0.0
Identities = 550/553 (99%)
Strand = Plus / Minus
Query: 1 attactgatcacaaacatgaacatctataccctcgtttattgcctcccatgtaaacacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 attactgatcacaaacatgaacatctataccctcgtttattgcctcccatgtaaacacat 494
Query: 61 ctgttccacaaaagccaagatgttcttgtgcttaattaatactataccttttattcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctgttccacaaaagccaagatgttcttgtgcttaattaatactataccttttattcattt 434
Query: 121 tcttaatttcctacgatgacatatgtttcaaaaatcatttatagtagctgaataagagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcttaatttcctacgatgacatatgtttcaaaaatcatttatagtagctgaataagagat 374
Query: 181 acagtacttgtagagtaaccatagattaataaataaaaaagcataaaaaggcatttaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acagtacttgtagagtaaccatagattaataaataaaaaagcataaaaaggcatttaaaa 314
Query: 241 aaaggaaaatacatccttccctttaatgttttaatataaaatgtaaacataaaattgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaaggaaaatacatccttccctttaatgttttaatataaaatgtaaacataaaattgtta 254
Query: 301 ccttacacttggatactcaaaataacaagatatgttaaaattttttcataattgatttca 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 253 ccttacacttggatactcaaaataacaagatatgttaaaaatttttcataattgatttca 194
Query: 361 tttggttaagagtctcctgaaatacagtccagcataacagagaggcacagcagcagcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tttggttaagagtctcctgaaatacagtccagcataacagagaggcacagcagcagcagg 134
Query: 421 aaaggtggctgttcatatggtatccctggtggagagcagggagacttgaacactgtttct 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 133 aaaggtggttgttcatatggtatccctggtggagagcagggagacttgaacactgttgct 74
Query: 481 taattcctgcttctccttctcattcaatatagcaaataagatggatttgaacataagcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 taattcctgcttctccttctcattcaatatagcaaataagatggatttgaacataagcag 14
Query: 541 attaatgtagata 553
|||||||||||||
Sbjct: 13 attaatgtagata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_a23.g1 MSMg01no108_a23.g1 CHROMAT_FILE:
MSMg01no108_a23.g1 PHD_FILE: MSMg01no108_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:46 2005
(402 letters)
>mm_chr14_83388498_83389299
Length = 802
Score = 690 bits (357), Expect = 0.0
Identities = 389/409 (95%), Gaps = 14/409 (3%)
Strand = Plus / Plus
Query: 4 aanaaaaagagagtgataacttagaaggttagaattgaacgtttggtgtttacattcaaa 63
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 190 aagaaaaagagagtgataacttagaaggttagaattgaacatttggtgtttacattcaaa 249
Query: 64 tttttgatggacttctgtatttgagattgttgagaggtgagtgtgtattttatgcaacat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttttgatggacttctgtatttgagattgttgagaggtgagtgtgtattttatgcaacat 309
Query: 124 tatttttagtttagtatagtttagtaatacaaataatgtaatatagtagaattacaactt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tatttttagtttagtatagtttagtaatacaaataatgtaatatagtagaattacaactt 369
Query: 184 gtcagcatctgcattcataccaaccttttttagtgggacaacctcaatttctttagctaa 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 370 gtcagcatctgcattcataccaaccttttttagtgggacaacctcgatttctttagctaa 429
Query: 244 gttgtgttttccctaanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa----- 298
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gttgtgttttccctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 489
Query: 299 ---------gttcattgataatattaattaagatatgaagaaattgtcttaaaaaatttt 349
|||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 490 aaaaaaaaagttcattgataatattaattaagatatgaagaaattgtcttagaaaatttt 549
Query: 350 atgaaaagattaatttggtagcatggcatgttataatgcacctccttcg 398
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atgagaagattaatttggtagcatggcatgttataatgcacctccttcg 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 38
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
