Query= MSMg01no108_n11.b1 MSMg01no108_n11.b1 CHROMAT_FILE:
MSMg01no108_n11.b1 PHD_FILE: MSMg01no108_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:50 2005
(414 letters)
>mm_chr14_8775742_8776555
Length = 814
Score = 756 bits (391), Expect = 0.0
Identities = 403/407 (99%)
Strand = Plus / Minus
Query: 8 ttccaggccttccctggctgggaccagatccttagctacaaggctagagtacagcctgac 67
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttccaggccttttctggctgggaccagatccttagctacaaggctagagtacagcctgac 555
Query: 68 atctgagctccagaagggtgagaaataccaagaggaaacagagaaaggttgggacaaagc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atctgagctccagaagggtgagaaataccaagaggaaacagagaaaggttgggacaaagc 495
Query: 128 agccaacaggggatcagatggctcctggccacgatgaggctgccgtggggccgggccaag 187
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 494 agccaacaggggatcagatggctcctggccacgctgaggctgccgtggggccgggccaag 435
Query: 188 gtctgctactgttctcctgccaggagggcccctcgcctgtatggatgcctggaaaccact 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtctgctactgttctcctgccaggagggcccctcgcctgtatggatgcctggaaaccact 375
Query: 248 ctgggcatctggagggaaggagttctggtttaggacgcctcaggaaagcccactggggta 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctgggcatctggagggaaggagttctggtttaggacgcctcaggaaagcccactggggta 315
Query: 308 taatatgagcttctagggtcaggagctaagggctcttaaactctaagatcacagacctgg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 taatatgagcttctagggtcaggagctaagggctcttaaactctaagatcacagacctgg 255
Query: 368 agatgaccctcaagtcctatggactcccagagagtgctggaccactg 414
|||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 254 agatgaccctcaagtcctatggactcccagagagtgctgggccactg 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_n11.g1 MSMg01no108_n11.g1 CHROMAT_FILE:
MSMg01no108_n11.g1 PHD_FILE: MSMg01no108_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:50 2005
(351 letters)
>mm_chr14_8664956_8665706
Length = 751
Score = 547 bits (283), Expect = e-160
Identities = 349/399 (87%), Gaps = 48/399 (12%)
Strand = Plus / Plus
Query: 1 tgtggattctaatgtaggagtggatctggcaagtgactgcagtgtcctcagttctccccg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 153 tgtggattctaatgtaggagtggatctgggaagtgactgcagtgtcctcagttctccccg 212
Query: 61 ctaccaggctgaagggatgtgtttgcgtcttgcttcctccatttgcctgctgattccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ctaccaggctgaagggatgtgtttgcgtcttgcttcctccatttgcctgctgattccatg 272
Query: 121 ggtaggttagactcctgactgataggacaacataataa-ca--a---------------c 162
|||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 273 ggtaggttagactcctgactgataggacaacataataatcatcattttcttttctgtgcc 332
Query: 163 ca-------tc-a----------------------tggtaaaggttcttgagtgaggaag 192
|| || | |||||||||||||||||||||||||
Sbjct: 333 cagggaacatccagcccttttcccaaaggtagagttggtaaaggttcttgagtgaggaag 392
Query: 193 gcagatctgtttaagcacaggaaggaatgagtcagtcaacggggcacaatggtttttgtt 252
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 393 gcagatctgtttaagcacaggaaggaatgagtcagtcaacggggcacaatggcttttgtt 452
Query: 253 tctccagctcgggcaggtcaatgtatcaatagcatcagcagctgtttagccaaggctcag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tctccagctcgggcaggtcaatgtatcaatagcatcagcagctgtttagccaaggctcag 512
Query: 313 gctagctattctttcttttctttggttttgttgttgttg 351
|||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gctagctattctttcttttctttggttttgttgttgttg 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
