GGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTAAGATCAACAAACCTGTAAGAAGCAGGTTGAAGTCATCTCA
AGCATATATAGTCCTCTCTCTTTTTGTTATTTTTTTTCTAAATCAAAACC
TCTCATCTACTAACAAGAAATTTTAATAAAAAATATAACTTAAGAACCTT
AGGTAGGAGATGGGAGGTACCAAATGAGTATAAAATTATGTAGACAACAA
GCTCAGAGAGAGGATGGTGGTCAGTTCTTACTCAGTGGTCAAGCGATCCC
CAAAGCATCACTGTGTGCTTTTCTATCCCCAAAAGATAAGCAGAAGGGAA
TCAGCAAAGGAAAGGCCTTTGATCAGACCAGTGACTAGAACCTAGCAATT
CTGGAATGTAAAACGCTGGAGCTACATAAGCTGTACCACCTCAGCAGGAC
TGCATCCAGGTCCCGTGGGAGCTGAATGTTCTGCAACGTAAGGGTTTGTG
TTTAAGAAAAGGAATACTAGGTGTGAACACTTAGTATATACTACCATGGA
TATTTATTTGTAATGGGGAAATGTACACCAAGTTGTCATAGTTCTTGAGA
ATTTCTTTTAGGATGTAACTGAAACTTGCCAAAATATATAAGACTGAGAA
GACTGTCTCCTCTTCCTTACCATCCAGAGTGTGTACGGAGAGCCCATGCA
AATGAGAGGCCCTGGTC

AATCTACCNNNNTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGT
TCCCCATTTTTCATAGGGTTATTTGTTTCTCTGGAGTCTAACTTCTTGAG
TTCTTTGTATGTATGGATACTAGCCCTCTATTGGATGTAGGGTTGGTAAA
GATCTTTTCCCAATCTGTTGGTTGCCATTTTGTCCTATTGACAGTGTCCT
TTGCCTTACAGAAGTTTGTAATTTCATGAAGTCCCATTTGTCAATTCTTA
GAGCATAGGTTATTGGTGTTCTGTTCAGGATATGTTCCCTCGTGCCCATG
TGCTCAAAGCTCTTTCCCACTTTCTTTTCTATTACTTTCAATGTATCTAA
ATTTATGTAGAGGTCCTTGATGCCCTTGCATTTAAACTTTGTACAAGGAT
ATAAGAATGGATTGATTTGGGGGCTGGCGAGATGGCTCAGTGGTTAAGAG
CATCGAGTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATG
TTGGCTCACAACCATCCGTAATGAAATATGATGCCCTCTTCTGGAGTGTC
TGAAAACAGCTACAGTGTACTTACATATTATAAATAAAATAAATCTTAAA
AAAAAAGACTGGATTGATTTGCATTCTTTTGCATGCTAACGTACATTCCC
TTCTTTCCGTTTTGTCTTAAACCC

Query= MSMg01no110_c21.b1 MSMg01no110_c21.b1 CHROMAT_FILE:
MSMg01no110_c21.b1 PHD_FILE: MSMg01no110_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:40 2005
         (656 letters)



>mm_chr14_15348557_15349612
          Length = 1056

 Score = 1195 bits (618), Expect = 0.0
 Identities = 645/654 (98%), Gaps = 3/654 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttaagatcaacaaacctgtaagaagcaggttgaagtcatctcaagcatatata 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaattctttaagatcaagaaacctgtaagaagcaggttgaagtcatctcaagcatatata 679

                                                                       
Query: 65  gtcctctctctttttgtta-ttttttttctaaatcaaaacctctcatctactaacaagaa 123
           |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtcctccctctttttgttatttttttttctaaatcaaaacctctcatctactaacaagaa 619

                                                                       
Query: 124 attttaat-aaaaaatataacttaagaaccttaggtaggagatgggaggtaccaaatgag 182
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 attttaataaaaaaatataacttaagaaccttaggtaggagatgggaggtaccaaatgag 559

                                                                       
Query: 183 tataaaattatgtagacaacaagctcagagagaggatggtggtcagttcttactcagtgg 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tataaaattatgtagacaacaagctcagagagaggatggtggtcagttcttactcagtgg 499

                                                                       
Query: 243 tcaagcgatccccaaagcatcactgtgtgcttttctatccccaaaagataagcagaaggg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcaagcgatccccaaagcatcactgtgtgcttttctatccccaaaagataagcagaaggg 439

                                                                       
Query: 303 aatcagcaaaggaaaggcctttgatcagaccagtgactagaacctagcaattctggaatg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aatcagcaaaggaaaggcctttgatcagaccagtgactagaacctagcaattctggaatg 379

                                                                       
Query: 363 taaaacgctggagctacataagctgtaccacctcagcaggactgcatccaggtcccgtgg 422
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 378 taaaacgctggagctacataagctgtaccacctcagcaggactgcatccaggtcccgt-g 320

                                                                       
Query: 423 gagctgaatgttctgcaacgtaagggtttgtgtttaagaaaaggaatactaggtgtgaac 482
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gagctgaatattctgcaacgtaagggtttgtgtttaagaaaaggaatactaggtgtgaac 260

                                                                       
Query: 483 acttagtatatactaccatggatatttatttgtaatggggaaatgtacaccaagttgtca 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acttagtatatactaccatggatatttatttgtaatggggaaatgtacaccaagttgtca 200

                                                                       
Query: 543 tagttcttgagaatttcttttaggatgtaactgaaacttgccaaaatatataagactgag 602
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 199 tagttcttgagaatttcttttaggatgtcactgaaacttgccaaaatatataagactgag 140

                                                                 
Query: 603 aagactgtctcctcttccttaccatccagagtgtgtacggagagcccatgcaaa 656
           ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 139 aagactgtctcctcttccttaccatccagagtgtgtacggacagcgcatgcaaa 86


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)