TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTCAGTGACCTTTACTTCCTTTATGCATTTATTAGTCTCTAATATT
TTGTGTCCAGGGACACAGTTCTGTCTTCCCACAACTCCCTCTGGATGATG
GTTGTAGATTCTTTCAGCCTTTCCTTTCCAACAATCAGCAATTCCACATT
ATTAATTGCTAAAATGTTTCTATACTTTTTGCTTCAGTGTTCTCTCACAC
TAAGTAAGCACCAAATTCCTCCTGTCAAATTGTTATCTTTTGGAATCTAA
TGTCTGTTTATTCTGACGCTAATAGAACTCTGCCAAGCTTCCCCTTCTGT
CTGATGCTAAACTCAGTAAAAGCAATGTCTTCTTAAAATCTAGACTAGTA
GTTTTCTAAATGACTCTTTTTTAATGAACTGAGAGTTTGGAAGAGAGACT
TATCACTAGTATTATTTAGCTTTCCTGTTCTGGGTTGGAGCCACTATATT
TTAGGCTAAGGATGGACTATTGAAGTATTGTCTTCATGCCACATTAAAGA
TAAAGTCCTTTTCCCAAAGCAGGGATGACTAAGAAAATGAAGGAAGTTTT
GAACACCTGTCCTCACTGCCATTAGCTAACTTCCTTACTGGATTTCCAGG
ATCTGGAGAAGATGTTGAAATTCTACTTCTCTTGTAGAAAACTTTTACCT
GAGACCTAGAGAAAA

TTTATTTTNNNTACGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTG
ATCCCCATTTTTAATGGGGTTATCTGATTTTCTGGATTTTCACCTTCTTC
AGTTCTTTATATATGTTGGATATTAGTCCTCTATATGATTTAGGATAGGT
AAAGATCCTTTCCCAGTATGTTGGTGGCCTTTTTGTCTTACTGAAGTTGT
CCTTTGCCTTACAGAAGCTTTGAGTTTGTTTATATAATGGATTTCGTTGA
TGGATTTCCATATATTAAACCATCCCTGCATCCCTGCAATGAAACCTACT
TGGTCAGGATGTATGATTGTTTTGATGTGTTCTAGGATTCGTTTAGCAAG
AATTTTATTGAAGACTTTTGCATCGGCATTCATAAGGGAAATTGGTTTGA
ACTTCTCTAATTTTTTGTATCTTTCTGTGGTTTAGGTATCAGAGTAACTG
TGGCTTCATAGAATGAATTGGGTAGAGTACCTTCTGCTTCTATTTTGTGG
AATAGTTTGTGCAGAACTGGAAATTAGATCTTCTTTGAAGGTCTGATAGA
ACTCTGCACTAATCCCATCTGGTCCTGGTCATTTTTTGGTTGGGAGATTA
TTAATGACTGCTTCTATTTCTTTAGTGGATATGGGACTGTTTTTATCTTT
AACTTAACCCTGATTTAACTTTGTNAA

Query= MSMg01no110_m19.b1 MSMg01no110_m19.b1 CHROMAT_FILE:
MSMg01no110_m19.b1 PHD_FILE: MSMg01no110_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:30 2005
         (672 letters)



>mm_chr14_83867392_83868468
          Length = 1077

 Score = 1178 bits (609), Expect = 0.0
 Identities = 655/673 (97%), Gaps = 5/673 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttcagtgacctttacttcctttatgcatttattagtctctaatattttgtgtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gaattccttcagtgacctttacttcctttatgcatttattagtctctaatattttgtgtc 818

                                                                       
Query: 65  cagggacacagttctgtcttcccacaactccctctggatgatggttgtagattctttcag 124
           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 817 cagggacacagttctgtcttcccacaactccctctggatgacagttgtagattctttcag 758

                                                                       
Query: 125 cctttcctttccaacaatcagcaattccacattattaattgctaaaatgtttctatactt 184
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 757 cctttcctttccaacaatcagcaattccatattattaattgctaaaatgtttctatactt 698

                                                                       
Query: 185 tttgcttcagtgttctctcacactaagtaagcaccaaattcctcctgtcaaattgttatc 244
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tttccttcagtgttctctcacactaagtaagcaccaaattcctcctgtcaaattgttatc 638

                                                                       
Query: 245 ttttggaatctaatgtctgtttattctgacgctaatagaactctgccaagcttccccttc 304
           |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 637 ttttggaatctaatgtctgtttattctgacacaaatagaactctgccaagcttccccttc 578

                                                                       
Query: 305 tgtctgatgctaaactcagtaaaagcaatgtcttcttaaaatctagactagtagttttct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgtctgatgctaaactcagtaaaagcaatgtcttcttaaaatctagactagtagttttct 518

                                                                       
Query: 365 aaatgactctttttt-----aatgaactgagagtttggaagagagacttatcactagtat 419
           |||||||| ||||||     ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 517 aaatgactttttttttttttaatgaactgagagtttggaagagagacttgtcactagtat 458

                                                                       
Query: 420 tatttagctttcctgttctgggttggagccactatattttaggctaaggatggactattg 479
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 457 tatttagctttcctgttctgggttggagccacaatattttaggctaaggatggactattg 398

                                                                       
Query: 480 aagtattgtcttcatgccacattaaagataaagtccttttcccaaagcagggatgactaa 539
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 397 gagtattgtcttcatgccacattaaagataaagtccttttcccaaagcagggatggctaa 338

                                                                       
Query: 540 gaaaatgaaggaagttttgaacacctgtcctcactgccattagctaacttccttactgga 599
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 337 gaaaatgaaggaagttttgaacacctgccctcactgccattagctaacttccttactgga 278

                                                                       
Query: 600 tttccaggatctggagaagatgttgaaattctacttctcttgtagaaaacttttacctga 659
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tttccaggatctagagaagatgttgaaattctacttctcttgtagaaaacttttacctga 218

                        
Query: 660 gacctagagaaaa 672
           |||||||||||||
Sbjct: 217 gacctagagaaaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1077
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1067
Effective search space:   706354
Effective search space used:   706354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)