Query= MSMg01no111_h18.b1 MSMg01no111_h18.b1 CHROMAT_FILE:
MSMg01no111_h18.b1 PHD_FILE: MSMg01no111_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:52 2005
(641 letters)
>mm_chr14_65886133_65887173
Length = 1041
Score = 1203 bits (622), Expect = 0.0
Identities = 634/638 (99%)
Strand = Plus / Plus
Query: 4 ggaattccagtcattagtgagatgatacggtttggcagcacagaccctgcaagaggcagg 63
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagtcattagtgagatgagacggtttggcagcacagaccctgcaagaggcagg 263
Query: 64 tggatctttgttactttaaagcccacctggtctacatagcaagttccaggccaaccaggg 123
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 264 tggatctttgttactttaaagccaacctggtctacatagcaagttccaggccgaccaggg 323
Query: 124 gtatgaggcagactctatctcaaaacaaaaacaaaatcgagacagaacaaaacgaaactt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtatgaggcagactctatctcaaaacaaaaacaaaatcgagacagaacaaaacgaaactt 383
Query: 184 agggcttggagtatcgaatacttggtagaatgcttgtccagcatgcatgaagccagaacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agggcttggagtatcgaatacttggtagaatgcttgtccagcatgcatgaagccagaacc 443
Query: 244 caactctgcataaatcaggcgtgtggcgaacactgcaatctagaacttgagagatgcagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caactctgcataaatcaggcgtgtggcgaacactgcaatctagaacttgagagatgcagg 503
Query: 304 caaaaggatccgaagtttaaggtcatccatgacttcaggagcaggtttgaggcctgcctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caaaaggatccgaagtttaaggtcatccatgacttcaggagcaggtttgaggcctgcctg 563
Query: 364 ggatagatccttaggaaaattattgtgtaatggggatggtgtggacaatggctcagaaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggatagatccttaggaaaattattgtgtaatggggatggtgtggacaatggctcagaaga 623
Query: 424 tttaggtcagaccggaagcatgtgacaactgggacctctgcttgggtgttgggctttagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttaggtcagaccggaagcatgtgacaactgggacctctgcttgggtgttgggctttagc 683
Query: 484 ctggagccatatgtagggggtgagaaccctgggccttctttctacagttttatcccaagt 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttggagccatatgtagggggtgagaaccctgggccttctttctacagttttatcccaagt 743
Query: 544 tacatgaaacacaatgacaggcagccattaaaaggaaagggagtcataagtacctgcaac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacatgaaacacaatgacaggcagccattaaaaggaaagggagtcataagtacctgcaac 803
Query: 604 ttgtacctgtggacaaggatgagacaatctttgctgtc 641
||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgtacctgtggacaaggatgagacaatctttgctgtc 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_h18.g1 MSMg01no111_h18.g1 CHROMAT_FILE:
MSMg01no111_h18.g1 PHD_FILE: MSMg01no111_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:52 2005
(376 letters)
>mm_chr14_65979689_65980466
Length = 778
Score = 625 bits (323), Expect = 0.0
Identities = 360/377 (95%), Gaps = 10/377 (2%)
Strand = Plus / Minus
Query: 1 ctcctgggttacagagcaagaaggactgaag----actttgaaggaaaaggaagggagaa 56
||||||||||||||||||||||||||||||| | |||||||||| |||||||||
Sbjct: 736 ctcctgggttacagagcaagaaggactgaagagaaa----gaaggaaaagaaagggagaa 681
Query: 57 gaggaaagggaaaagaaggggaggacgacaagggaagaagagaataggagaggaaggtag 116
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 gaggaaagggaaaagaaggggaggacgacaagggaagaagagaaaaggagaggaaggtag 621
Query: 117 aaaagaggaaggaaccaaaggaaagaacaggagaaaggaggagagaacatggcccttacg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaagaggaaggaaccaaaggaaagaacaggagaaaggaggagagaacatggcccttacg 561
Query: 177 gcctccagtcccatccctcaagctcctctccccctcaattcactgattctgcatctcaga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcctccagtcccatccctcaagctcctctccccctcaattcactgattctgcatctcaga 501
Query: 237 gaagtaagcagctgatacaaaaatcccagctcatgccacaaccttctgtaac--tattct 294
||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 500 gaagtaagcagctgaaacgaaaatcccagctcatgccacaaccttctgtaaccttattct 441
Query: 295 tcaaattcagatgttgcacgctgacacttgttggatttgttcagcaaatcaccctaagtc 354
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 tcaaattcagatgttgcacgctgacacttgggggatttgttcagcaaatcaccctaagtc 381
Query: 355 actcttgcgaaagagag 371
|||||||| ||||||||
Sbjct: 380 actcttgcaaaagagag 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 778
Length adjustment: 9
Effective length of query: 367
Effective length of database: 769
Effective search space: 282223
Effective search space used: 282223
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
