Query= MSMg01no113_a14.b1 MSMg01no113_a14.b1 CHROMAT_FILE:
MSMg01no113_a14.b1 PHD_FILE: MSMg01no113_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:21 2005
(482 letters)
>mm_chr14_80412025_80412906
Length = 882
Score = 893 bits (462), Expect = 0.0
Identities = 478/484 (98%), Gaps = 2/484 (0%)
Strand = Plus / Plus
Query: 1 ctaaatgacctttctagtttatggaaagtggtaccataaatcttaatgacttgtctttgg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaatgacctttctggtttatggaaagtggtaccataaatcttaatgacttgtctttgg 260
Query: 61 ccacttgaagtcaggcatcttctctgtcctggatttatcttcatgaggctagaaacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacttgaagtcaggcatcttctctgtcctggatttatcttcatgaggctagaaacacag 320
Query: 121 tttccctgattgtgggtatcttccctttttgaatgaccacctatttctcttagagttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttccctgattgtgggtatcttccctttttgaatgaccacctatttctcttagagttatt 380
Query: 181 ctccacatactgaaatttcttgtgcatcaggccttatgtagatctgtttggagttgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccacatactgaaatttcttgtgcatcaggccttatgtagatctgtttggagttgtttt 440
Query: 241 gtacaaggtaatatatatgaatcaattcctagtcttctgcatgcagcagtccagctggaa 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtacaaggtaatagatatgaatcaattcctagtcttctgcatgcagcagtccagctggaa 500
Query: 301 ttgtgtaatttgttgaacgtgctgtcttttcttcagtgtgcattttctgcctttttgtcg 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtgtaatttgttgaaggtgctgtcttttcttcagtgtgcattttctgcctttttgtcg 560
Query: 361 aaagtcaggtgtccactgatgtgtgtggagttatatctcaccctcaattctattacattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagtcaggtgtccactgatgtgtgtggagttatatctcaccctcaattctattacattg 620
Query: 421 atccatgtgtctgtttttaatgccagcgccatactgattttttttt--attactatggct 478
|||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 621 atccatgtgtctgtttttaatgccagtgccatactgatttttttttttattactatggct 680
Query: 479 ctgt 482
||||
Sbjct: 681 ctgt 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_a14.g1 MSMg01no113_a14.g1 CHROMAT_FILE:
MSMg01no113_a14.g1 PHD_FILE: MSMg01no113_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:21 2005
(498 letters)
>mm_chr14_80594702_80595599
Length = 898
Score = 948 bits (490), Expect = 0.0
Identities = 496/498 (99%)
Strand = Plus / Minus
Query: 1 tcctcacttcagtctgaccccatcaagtaagcccaggcgttggggaatttcagcacctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tcctcacttcagtctgaccccatcaagtaagcccaggcgttggggaatttcagcacctct 639
Query: 61 attattgcttttgcatgtcagccgccttcaaaaatgtttctgttctgatttagttaccta 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 638 attattgcttttgcatgtcagccaccttcaaaaatgtttctgttctgatttagttaccta 579
Query: 121 ttaatctgtgccccagaaccacttttgttccagtactttgagaactgggatatcttttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttaatctgtgccccagaaccacttttgttccagtactttgagaactgggatatcttttcc 519
Query: 181 ccaaagtaatctcttagggtagagctctcctctgaaaggaaaatttttgcaatggcactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ccaaagtaatctcttagggtagagctctcctctgaaaggaaaatttttgcaatggcactc 459
Query: 241 taaagtggactaaagggcaagatgctgaaaataaaactactttctccctctcataaacgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 taaagtggactaaagggcaagatgctgaaaataaaactactttctccctctcataaacgc 399
Query: 301 caagtgagtctgtcagggaaaacacaggaacaccagacctggaaaaggtcaaagtctctg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 398 caagtgagtctgtcagggaaaacacaggaacaccagacctggaaaaggtcaaagtccctg 339
Query: 361 ggccacctggggccactcagaactccaaggtcttccaagtccacgtgtccttgcctatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggccacctggggccactcagaactccaaggtcttccaagtccacgtgtccttgcctatct 279
Query: 421 gagaactgaacaattgttgaggcatgagaactctaaacagctacaaatcactaataaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gagaactgaacaattgttgaggcatgagaactctaaacagctacaaatcactaataaatc 219
Query: 481 tgtacaaaaggacactaa 498
||||||||||||||||||
Sbjct: 218 tgtacaaaaggacactaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
