Query= MSMg01no113_h23.b1 MSMg01no113_h23.b1 CHROMAT_FILE:
MSMg01no113_h23.b1 PHD_FILE: MSMg01no113_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:56 2005
(286 letters)
>mm_chr14_80603840_80604525
Length = 686
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%)
Strand = Plus / Minus
Query: 5 gaattctccacagcaccacattcgtcatggctactgttcaatatatgtcgagaagaaact 64
||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 384 gaattctccacagcatcacattcatcatggctactgttaaatatatgtcgagaagaaact 325
Query: 65 acacagataagcctatacttccacagggtcaccctataaggaacatgttcagatcagacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acacagataagcctatacttccacagggtcaccctataaggaacatgttcagatcagacc 265
Query: 125 cgtaacagaaatcacagcaactacctggacattgagcagtgatcacaagcatatgcagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgtaacagaaatcacagcaactacctggacattgagcagtgatcacaagcatatgcagat 205
Query: 185 gacctggctatgaatcctatcaccaccctgacctaatagtgtgccttggacaactcatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gacctggctatgaatcctatcaccaccctgacctaatagtgtgccttggacaactcatct 145
Query: 245 aaattctctaaatctcaggtgcgttccttattttaaaagagc 286
|||||||||||||||||| || ||||||||||||||||||||
Sbjct: 144 aaattctctaaatctcagttgtgttccttattttaaaagagc 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no113_h23.g1 MSMg01no113_h23.g1 CHROMAT_FILE:
MSMg01no113_h23.g1 PHD_FILE: MSMg01no113_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:56 2005
(273 letters)
>mm_chr14_80512631_80513303
Length = 673
Score = 484 bits (250), Expect = e-141
Identities = 259/262 (98%), Gaps = 1/262 (0%)
Strand = Plus / Plus
Query: 1 ctttggtgatgaatagaaatgtggaagtgtaagctgaataaatc-tttcctccccaactt 59
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 ctttggtgatgaacagaaatgtggaagtgtaagctgaataaatcctttcctccccaactt 259
Query: 60 gcttcttagtcatgatgtttgtgcaggaatagaaaccctgactaaatcaacacatgaata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcttcttagtcatgatgtttgtgcaggaatagaaaccctgactaaatcaacacatgaata 319
Query: 120 gtatttcctgaaaactgtgtttgaggaaagggatatagaaaatggtgcttttgtgttcac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtatttcctgaaaactgtgtttgaggaaagggatatagaaaatggtgcttttgtgttcac 379
Query: 180 aaaaaataaactgtaagtggggtacttaatggtatgattgagcctgtattactgctctta 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaaaaataaactgtaagtggggtacttaatggtatgattgagcctgtattactgctctta 439
Query: 240 aagaattgcagtgtttatgtgg 261
||||||||||||||||||||||
Sbjct: 440 aagaattgcagtgtttatgtgg 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
