Query= MSMg01no113_m08.b1 MSMg01no113_m08.b1 CHROMAT_FILE:
MSMg01no113_m08.b1 PHD_FILE: MSMg01no113_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:18 2005
(535 letters)
>mm_chr14_109799755_109800691
Length = 937
Score = 671 bits (347), Expect = 0.0
Identities = 396/417 (94%), Gaps = 12/417 (2%)
Strand = Plus / Minus
Query: 5 gaattcattattttgccgg-ataacttttcagatagatgataaaaacatttttaacagtg 63
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcattattttgctggtataacttttcagatagatgataaaaacatttttaacagtg 358
Query: 64 tgaataaatatgatgattgtaggc-aaaaatataaagcagtattgagaagtatgcctcta 122
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 357 tgaataaatatgatgattgtaggcaaaaaatataaagcagtattgagaagtatgtctcta 298
Query: 123 aattgacatttcagaatagttaatttatatgatatttaaaactcataataagagttctct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aattgacatttcagaatagttaatttatatgatatttaaaactcataataagagttctct 238
Query: 183 tacatccttcctcaaatgttaaaatcccctcaa------ttc---t-ttggagcaggaaa 232
||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 237 tacatccttcctcaaatgttaaaatcccctcaaatgcggttcaattcttggagcaggaaa 178
Query: 233 ttgatattagtacaagtacaataagctatgctgtttattcaagatttgagtttccccatt 292
|||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 177 ttgatattagtacaagtacattaagctacactgtttattcatgatttgagtttgcccatt 118
Query: 293 tttatttttatttatttatttacttcagagctgagggccaaacccagggtcttgcgcttg 352
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 117 tttatttttatttatttatttatttcagagctgagggccaaacccagggtcttgcgcttg 58
Query: 353 ctagcactcgctctaccactgggctaaatctccaaaccctcccatttttaatttttc 409
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ctagcacttgctctaccactgggctaaatctccaaaccctcccatttttaatttttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 937
Length adjustment: 10
Effective length of query: 525
Effective length of database: 927
Effective search space: 486675
Effective search space used: 486675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_m08.g1 MSMg01no113_m08.g1 CHROMAT_FILE:
MSMg01no113_m08.g1 PHD_FILE: MSMg01no113_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:18 2005
(481 letters)
>mm_chr14_109696324_109697204
Length = 881
Score = 837 bits (433), Expect = 0.0
Identities = 469/481 (97%), Gaps = 1/481 (0%)
Strand = Plus / Plus
Query: 1 aagaaactagatttccaaaaacaaaatgatctgattggaaaaaaaaaaaaaaggaggtaa 60
|||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||
Sbjct: 202 aagaaactagatttccaaaaacaaaatgatcttattgggaaaaaaaaaaaa-ggaggtaa 260
Query: 61 agagcaaaacagaattcttaacaggttgatctcaaatggctgagaaaccctggaaggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagcaaaacagaattcttaacaggttgatctcaaatggctgagaaaccctggaaggagt 320
Query: 121 gttcaacatccttagccatcagtgaaaagccaatcaaaaggactccaagattccatagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gttcaacatccttagccatcagtgaaaagccaatcaaaaggactccaagattccacagta 380
Query: 181 tactggtcataatggctaagatcagaagcacaagtgattgctcatgctggtgaggatgga 240
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 381 tactggtcataatggctaagatcagaagcacaagtgactgctcatgctggtgagaatgga 440
Query: 241 gaacaaggggtggcttcttataaaattgagaatgaatctacctccagacccagacatact 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacaaggggtggcttcttagaaaattgagaatgaatctacctccagacccagacatact 500
Query: 301 actactgagtataaaaccaaagaaactccaccataccacgagacactttctccaaatcca 360
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 501 actactgagtataaaaccaaataaactccaccataccatgagacactttctccaaatcca 560
Query: 361 ttcccagcatagttatttcaaagtttatataataggaggactgctttgtactcataccta 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 561 ttcccagcatagttatttcaaagtttatataataggaggactactttgtactcatactta 620
Query: 421 cagtggattacttaaagagggagttgacctctgtatgtgggatggttagagctggctcag 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 cagtggattacttaaagagggagttgacctctgtatgtgggatggttagacctggctcag 680
Query: 481 c 481
|
Sbjct: 681 c 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
