Query= MSMg01no114_p04.b1 MSMg01no114_p04.b1 CHROMAT_FILE:
MSMg01no114_p04.b1 PHD_FILE: MSMg01no114_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:46 2005
(622 letters)
>mm_chr14_29452343_29453367
Length = 1025
Score = 1147 bits (593), Expect = 0.0
Identities = 610/617 (98%), Gaps = 3/617 (0%)
Strand = Plus / Plus
Query: 4 ggaattccattgcaaggtctagtgaccacctcttggccagcttaagagtcccatggactc 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccattgcaaggtatagtgaccacctcttggccagcttaagagtcccatggactc 263
Query: 64 aaatgaagccagttggtgtcatttcagttggctcgacaggatagaagcctcggtgtttct 123
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 aaatgaagccagttggtgtcatttcagttggctcgacaggatagaagcctgggtgtttct 323
Query: 124 cagaatttggacctgctgctataaagcacaaagtgagaaatccctcattgactatctagt 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagaatttggacctgttgctataaagcacaaagtgagaaatccctcattgactatctagt 383
Query: 184 tccacatgaatgtttagtggggcggctgtaaagtctatgctgggaagatgcaggggagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccacatgaatgtttagtggggcggctgtaaagtctatgctgggaagatgcaggggagat 443
Query: 244 tggcctaggtgacatcttcttttcatactttcaaatttcaacttaaactctagccccttt 303
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggcctaggtgacaccttcttttcatactttcaaatttcaacttaaactctagccccttt 503
Query: 304 gagggagtgttgtttggagtcattataaaacacaacatgtggttcatgtggttgaattcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagggagtgttgtttggagtcattataaaacacaacatgtggttcatgtggttgaattcc 563
Query: 364 attgtcatttccatatactaataa---atgtgctctttttttattattatttggggctgc 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 attgtcatttccatatactaataataaatgtgctctttttttattattatttggggctgc 623
Query: 421 aaagatgttcagtagataagggcacttgctatatgagcatgagaacctgagttcaagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaagatgttcagtagataagggcacttgctatatgagcatgagaacctgagttcaagtca 683
Query: 481 tgagctcctatataaaagctggatttggccacatgcacatctaactactattgttggggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgagctcctatataaaagctggatttggccacatgcacatctaactactattgttggggc 743
Query: 541 tggggaagcagtatagaataggctctcttcaggtctccatttgtatacattacacacaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tggggaagcagtatagaataggctctcttcaggtctccatttgtatacattacacacaca 803
Query: 601 cacacacacacacacac 617
|||||||||||||||||
Sbjct: 804 cacacacacacacacac 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1025
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1015
Effective search space: 621180
Effective search space used: 621180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_p04.g1 MSMg01no114_p04.g1 CHROMAT_FILE:
MSMg01no114_p04.g1 PHD_FILE: MSMg01no114_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:46 2005
(389 letters)
>mm_chr14_29521786_29522574
Length = 789
Score = 748 bits (387), Expect = 0.0
Identities = 387/387 (100%)
Strand = Plus / Minus
Query: 1 ctgggtaacatagtgagtgattctttgcttaagatttggaagctgtaaaggcatttccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctgggtaacatagtgagtgattctttgcttaagatttggaagctgtaaaggcatttccaa 328
Query: 61 agaagcttcaccatgttttttgttttttgttttaattcccagaagcagggcaagagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agaagcttcaccatgttttttgttttttgttttaattcccagaagcagggcaagagtgtt 268
Query: 121 tcaatctggcagatcttcacagtactcagaactctccgcctttcatgatcagggattgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcaatctggcagatcttcacagtactcagaactctccgcctttcatgatcagggattgaa 208
Query: 181 aagggacatctttatttttaattatgtctatctggagtatgtacaggagagctggtgacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aagggacatctttatttttaattatgtctatctggagtatgtacaggagagctggtgacc 148
Query: 241 atggtggccaaatgtagtgaacgcctctcaagttggagtcacaggtaattgggagccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atggtggccaaatgtagtgaacgcctctcaagttggagtcacaggtaattgggagccacc 88
Query: 301 catcatggtcctgggaatgaaactaagaacagaacatgatgctcttcactactgagccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 catcatggtcctgggaatgaaactaagaacagaacatgatgctcttcactactgagccat 28
Query: 361 cacattggcctctacaatcaagcctga 387
|||||||||||||||||||||||||||
Sbjct: 27 cacattggcctctacaatcaagcctga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
