CCTTTTTTCTATAATTGCGGCGCTAAACGACTCCTATTTCATAGCGAGCG
CGGAATTCCATATCGTTGCTAGAAAAGTCCTAGCCGGAAGGGAGAATACA
ATTGCCTTTGTTAGATAAAAAGCACATACCACAGACTTGGCTTGTGCTCG
TCTCTCTTCTCAGCTCTTGTCAATTATTGACAGCCTTTGTCTTTCTTTTG
CAGCCATTTCACCTTACAACCCACACAGAGAAAGAAGAGCCAGGAAGTTC
AAGTTCATACCCTGATCACTCCTCATTCACTACAGCACAATGAGAGCAGT
AACATGAAAGCCACAACAGTGACAATTTTTATGGCTGCTACAGTACAATG
AGAATTTTGTTCCAGATGTCCCACGAGGCAATTAAAAGACATTGTCAGAT
GGAATTTTCTACAACATGAAAAACATCCTAGGCTCATTCAATTAACACTG
AGACCAAGATGGTGAGAGGCATCTCTGAGCCTTTATTCTCATTCCTTCAT
TACAAAGCCATGAGCATCTCCTCACCCAGCTATGTTCTTGCTGGACTACA
TCTTGATGCCAAGAATCATCTAAAGTGTGACCCCAGCCAACTATAAAATC
CATTCATATTTTGTTCCTCTACTAACAATGAACGTTAGGAATAAGAAGCA
GAGCTATCTACAGCAGAATATGTGAGCGCGAGAGAAATGGTGTGCATGGG
ACACTG

NNNCCAATAAANNNNNANCCTGNCNNCCCCTGNCTCCAAAATANNNGANN
TANANAANATTCCCGAAAATCAGAAAGAAAAAGAAAAAAATCTCTGAGCT
AGGGGAGGAGGGAGAAGGACGCTAGGGGAGCTTTNNNNTNNCNTCCCCAN
NCAATCTCAGACAATAANTNNTCCNNNCTNAANAATAANGGATGGAAGGG
GACTAAAGCGTAAAAAGAGAGGGGGAAAGGAACAAGAGAAGAAGGGCTGG
GCGCCNNNNNNNNTNNTNCCCNNNNNNNNNNNNNTCNNNNNNNNNNCCCA
NANTTTTTTCCTCTTAAAAAACCNAAAAAAGAAAAAANCNCTTCTTTNTN
TTTCCCCCCCCCCCNNCNAAAAACAAAAAAAAACCCCGGGTTCTGGGGGG
GGGGGAGGGGGAGAGGGGGGGGAAAACTGAGAGGGGAGGGGGAGGGGGGG
GGCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCNCNNNN
NNNNNNNNNNNCCNNNNNNNNNNNNANNNCCAAAAAACCCCCNNCNAAAA
AACCCCCCCCTATCCCNCTTTTCCNNNNCCAACCCCCCNNCCCCCCNNCN
NCNCCCCCCCCCCCACNNNCCTTCCNCCNCCNNNNNNNNNNNNNNNNCCC
TCCCCCAATNNACAAATCACCCCNCCCCCCCCCCCCCCTCNCTCCCNCCC
CCCNCCNCCTNCTCNCCCCCCCCCTNNTCTCCTNNCCCCTCCCCNCCCCT
ATATAAACAAAAAAAAAAATAAAAAAAAAAAA

Query= MSMg01no116_h18.b1 MSMg01no116_h18.b1 CHROMAT_FILE:
MSMg01no116_h18.b1 PHD_FILE: MSMg01no116_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:45 2005
         (552 letters)



>mm_chr14_10573518_10574469
          Length = 952

 Score = 1021 bits (528), Expect = 0.0
 Identities = 546/556 (98%), Gaps = 8/556 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctagccggaagggagaatacaattgcctttgttagataaaaagcacataccacagact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctagccggaagggagaatacaattgcctttgttagataaaaagcacataccacagact 260

                                                                       
Query: 61  tggcttgtgctcgtctctcttctcagctcttgtcaattattgacagcctttgtctttctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcttgtgctcgtctctcttctcagctcttgtcaattattgacagcctttgtctttctt 320

                                                                       
Query: 121 ttgcagccatttcaccttacaacccacacagagaaagaagagccaggaagttcaagttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcagccatttcaccttacaacccacacagagaaagaagagccaggaagttcaagttca 380

                                                                       
Query: 181 taccctgatcactcctcattcactacagcacaatgagagcagtaacatgaaagccacaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taccctgatcactcctcattcactacagcacaatgagagcagtaacatgaaagccacaac 440

                                                                       
Query: 241 agtgacaattttta----tggctgctacagtacaatgagaattttgttccagatgtccca 296
           |||||||||    |    |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 agtgacaat----aagaatggctgctacagtacaatgagaattttgttccaggtgtccca 496

                                                                       
Query: 297 cgaggcaattaaaagacattgtcagatggaattttctacaacatgaaaaacatcctaggc 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cgaggcaattaaaagacattgtcagatggaattttctacaacatgaaaaacatcctaggc 556

                                                                       
Query: 357 tcattcaattaacactgagaccaagatggtgagaggcatctctgagcctttattctcatt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcattcaattaacactgagaccaagatggtgagaggcatctctgagcctttattctcatt 616

                                                                       
Query: 417 ccttcattacaaagccatgagcatctcctcacccagctatgttcttgctggactacatct 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 617 ccttcattacaaagccatgagcatctcctcacccagctatgttcttgctggactatatct 676

                                                                       
Query: 477 tgatgccaagaatcatctaaagtgtgaccccagccaactataaaatccattcatattttg 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgatgccaagaatcatctaaagtgtgaccccagccaactataaaatccattcatattttg 736

                           
Query: 537 ttcctctactaacaat 552
           ||||||||||||||||
Sbjct: 737 ttcctctactaacaat 752


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)